Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01916 ATGAGAAGTAACGTGTTTCCCTCTCTATTGCTCCTCCTTCTACTTCACCCTTCTGAAGGTGAAGACATTGCCATTTACTGGGGTCAAAACCCCAATGAGGGAAACCTTACAGAAACATGTGCAACAGGAAAATACTCCTACGTCAACATAGGCTTCCTTTCCAACTTTGGGAATGGCCAAACCCCAAAACTGGACCTGGCGGCTAATCATTGTGACGTCGCATCTTCTAATGGGTGTACTGAGATCGGGAGAGAAATTAGAAATTGTCAAAAGCAAGGGATCAAGGTGATGCTTTCTATTGGAGGAGGAGGTAGTGATGATTACTCTATAACTTCCCTTGAGGATGCCAAGAATGTTTCGGATTACTTGTGGGACAATTTCCTGGGTGGCTCATCCTCATCACGCCCATTTGGGGATGTAGTCTTAGATGGCATTGACTTTGACATAGTGGCAGGTGAATCATTGTTTCTGGGAAACCTTTCCCTTCAACTCGTTTCATATTCACAGACACGCAAAGTGTACCTGTCAGCGGCTCCTCAGTGTCCATTTCCTGATGCTATGCTCGATTCCGCCCTTGCTACTGGCCTTTTTGACTACGTCTGGATACAATTCTACAACAATCCTTCATGCGATTATACCCAAAACAATTTCGACAACTTCCTTAAAGCATGGAACCTTTGGTCCACGTCATTGAATGCAGGGAAAATATTTCTGGGGTTACCAGCAGATCAAACTGCAGCAGCAAGCGGTTATGTTTCAGCTGATGTATTAGTTTCTAAGATCTTGCCTGAACTAAACAAGTCACCAAATTATGGGGGTGTCATGTTGTGGTCAAGGTACGAGGATAAAATGAGTGGATACAGCTCCTACATTCAAAATTTTCACAGAAATCAGACTCCACACTCTCTATGCACACCTCAAAGCCTTCCTTCCTGCAGGAGCTCTGAAGCTGATTTCGTGGAAAGTGTTGGTAACATGTCCACCGTTGGCATTCAAGTTTATGCTGGCAGCAATGGTACGCAGTGCTGTGAGATCATATGTAGGAACAATTGTTCCTGTCAAGCATATGCCCCAATAAACCACAAAAACAATACTGGGTGTCAGATATGGCTCAAAGGAACAGAATTGGTTAGAGCCTCTGTAGACACATCACTGCCCATCTATGTTTCTGTTGCACTGCTCCCGGAAGACAAAAGTACGTCCAGATTCCCCACCACAAAAGTAAACCGGTGGTACATATGGCTCATCGTTGGGGTGGCAGCAGCATTTGCAATACCTGCAATCTTCTATTTATGGCGTGTCTTGTGGATAAATTACAAAGCTAAAGTGGAGAGAAAGAAGATGCAGGAGAAGTTATTGCATGACATTGGAGGTAATTCCAGAAAAAGTAAGAACAAGGGAAAGACGAGCAATGGGGTTGAAATATTCACCTTTGAAACCATTGTTGCTGCAACAGAGAATTTCTCAGCAGCTAATAAGCTAGGAGAGGGTGGATTCGGTCCTGTTTATAAGGGAACACTAAGTGATCAGCAAGAAGTAGCAATCAAGCGACTTTCTAAGAGTTCAGGACAGGGGGTAATGGAATTTAAGAATGAAGCCAAACTTATGGCCAAACTCCAACACACTCATCTTGTAAAACTTCTAGGATTCTGCATCCAGAGAGATGAAAGAATATTGGTTTATGAATACATGCCTAACAAGAGCTTAGACTTCTACCTATTTGATTCACCTAGAAAGAACTTGCTAGACTGGGAAAAACGGTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTACACAAGTACTCGAGACTAAAGGTGATACATCGAGACCTGAAAGCAGGTAATATATTGCTTGATCACGAGATGAATCCTAAGATATCTGACTTTGGCCTGGCTCGAATATTTGGTGTAAGGGCATCAGAAGAAAACACAAACAGAGTTGTTGGTACATATGGATACATGGCTCCAGAGTATGCAATAAATGGTGTTGTGTCCATCAAAATAGATGTATTCAGCTTTGGTGTGCTGCTACTAGAAATACTTAGTGGCAAGAAAAATAATAGTCGTTATGATTCGGATCGTCCACTCAACCTCATAGGATATGTGTGGCAGCTCTGGAATGAAGGCAGAACTCTAGAGTTGATAGACCCAGATTCGCATGAACTATGTCCTCAGAATGCAGTTTTGAGATGTATTCATATCGGCCTGCTGTGTGTACAAGATCAAGCTACAGATAGACCAACCATGGCAGACATTGTTTCATTTCTATCAAATGATACAGTGGAACTTCCCCAACCAAAGCAGCCAGCATTCTTCATCAATGTGGTTGTGGAAGACTCGGAGCTTCCTTACAGCAGACAAGAACTTCATTCCTCAAACGACTTAACATTTTCTAGCACACATGGAAGATAA 2421 0.4271 MRSNVFPSLLLLLLLHPSEGEDIAIYWGQNPNEGNLTETCATGKYSYVNIGFLSNFGNGQTPKLDLAANHCDVASSNGCTEIGREIRNCQKQGIKVMLSIGGGGSDDYSITSLEDAKNVSDYLWDNFLGGSSSSRPFGDVVLDGIDFDIVAGESLFLGNLSLQLVSYSQTRKVYLSAAPQCPFPDAMLDSALATGLFDYVWIQFYNNPSCDYTQNNFDNFLKAWNLWSTSLNAGKIFLGLPADQTAAASGYVSADVLVSKILPELNKSPNYGGVMLWSRYEDKMSGYSSYIQNFHRNQTPHSLCTPQSLPSCRSSEADFVESVGNMSTVGIQVYAGSNGTQCCEIICRNNCSCQAYAPINHKNNTGCQIWLKGTELVRASVDTSLPIYVSVALLPEDKSTSRFPTTKVNRWYIWLIVGVAAAFAIPAIFYLWRVLWINYKAKVERKKMQEKLLHDIGGNSRKSKNKGKTSNGVEIFTFETIVAATENFSAANKLGEGGFGPVYKGTLSDQQEVAIKRLSKSSGQGVMEFKNEAKLMAKLQHTHLVKLLGFCIQRDERILVYEYMPNKSLDFYLFDSPRKNLLDWEKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKAGNILLDHEMNPKISDFGLARIFGVRASEENTNRVVGTYGYMAPEYAINGVVSIKIDVFSFGVLLLEILSGKKNNSRYDSDRPLNLIGYVWQLWNEGRTLELIDPDSHELCPQNAVLRCIHIGLLCVQDQATDRPTMADIVSFLSNDTVELPQPKQPAFFINVVVEDSELPYSRQELHSSNDLTFSSTHGR 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01916 806 SUPERFAMILY (Trans)glycosidases 19 291 IPR017853 -
Phco10g01916 806 ProSiteProfiles Protein kinase domain profile. 488 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01916 806 Pfam Protein tyrosine and serine/threonine kinase 491 759 IPR001245 GO:0004672|GO:0006468
Phco10g01916 806 SMART serkin_6 488 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01916 806 Pfam Domain of unknown function (DUF3403) 761 806 IPR021820 GO:0004674
Phco10g01916 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 454 563 - -
Phco10g01916 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Phco10g01916 806 Pfam Glycosyl hydrolases family 18 23 282 IPR001223 GO:0005975
Phco10g01916 806 Gene3D Phosphorylase Kinase; domain 1 461 563 - -
Phco10g01916 806 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 21 298 IPR001223 GO:0005975
Phco10g01916 806 SUPERFAMILY Protein kinase-like (PK-like) 471 791 IPR011009 -
Phco10g01916 806 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 313 797 - -
Phco10g01916 806 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 564 767 - -
Phco10g01916 806 Pfam PAN-like domain 336 372 IPR003609 -
Phco10g01916 806 FunFam Acidic endochitinase SE2 21 295 - -
Phco10g01916 806 CDD GH18_hevamine_XipI_class_III 22 293 IPR045321 -
Phco10g01916 806 Gene3D Transferase(Phosphotransferase) domain 1 564 770 - -
Phco10g01916 806 CDD STKc_IRAK 494 759 - -
Phco10g01916 806 Gene3D Glycosidases 21 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01916 Phco-Chr10 41190413 41193586 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco10g01916 PK_Tyr_Ser-Thr 3.5e-50 CL0016