Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01865 ATGAATCATTCAACAAAACACCGTTTGATGTTGTTACTATTACATATAATTCTGCTTCGTCTTTGTTGCACAAGTTCTTATCCCACGCCAACAAACTGCACCGACACAAGCCGCGTTTGTACTTCGTTCTTGGCCTTCAAACCTAAACCAAACCAAACCTTGCCTGTGATACAAAGCATGTTTGACGTGTTGCCCGGTGAGATCACTGTCGAAGACATTGGCTGGAATTATTTATTCATCAGGAAAAACTGTTCTTGTGATGCTGGTATGAAGAAGTTTGTGTCTAACACCACACTCACAGTGAAATCCAATGGAGGGTTTGTGTATGATTTGGTGAAGGAAGCCTATGATGGGCTTGCTCTCTTGCCCAACACGACACATTGGGCAAGAAAAGATCATGGTGTCATACCACTGAACTTGTTCTGTAGCTGCTCCAGTGGACTGTGGAACTATTTGATGAGCTATATCATCAGAGATGGGGATAGTGTCGAATCACTAGCAAGCCGGTTTGGGGTTAGTATGGATAGCATTGAGACAGTGAATGGCATTGACAATCCTGGTAGCTTCACTGTTGGTTCTCTCTATTATATACCTTTGAATTCGGTTCCTGGTGAGCTTTATCACTTGAAGAATGATACTTCTCCAGTTCCAGTCCCTTCCCCATCTGTAGATGAAATTTCAGCTGACCAAATCAACCACAAGGATCGTGTACCCCATGAATGGATTGTAGGAGGTTTTGGGGTTGGTCTCGCTCTGATAATATTAAGCATTATTGTCTGTGTGTCCCTGAGATCACCCAATTGCTTGGTTGAAGCCAGAAATAATGCAAAAAATTCTGCAGGAAAGATCTCTAATAAGTTCTATGTTTTTGGCAATCCAAAATTGTTTTGTGGATGTGGCAAACCTGTGGACCAGAAGCAGACTGATGGTGAAACCAGTAATCATCAAATTACCGTTACCAAAGCATCGTCTCTGGTACCAGACATGTTGGACATGGATAGGCCTGTGCTTTTTTCATATGACGAGATTTTTGCCTCAACCGATGGTTTCTCTGATTCAAATCTACTTGGGGGTTGTGTTTACTATGGTCTCCTTCGTGATCAGGAAGTTGCCATTAAAAGAATTACAGCTACTAAAACTAAAGAATTTATGTCAGAGATAAAAGTTCTGTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATCGGCTATGCGGCTAGTCATGATGATTTTTTCCTTATTTATGAATATGCTCAGAAGGGTTCACTCAGCAGCCATTTGCATGATACTCAAAATAAGGGTCATTCATCTCTTTCTTGGATCACAAGGGTCCAGATTGCACTTGATGCTGCTAGGGCCCTTGAATACGTACATGAACATACAAAAACTCGCTACGTCCATCAAGGTATCAAGACAAGCAACATTTTACTTGATGCTTCTTTTAGAGCCAAGATATCAGATTTTGGGTTAGCAAAACTAGTTGGTAAAACAAATGAGGGAGAAACCACAGCATCCAATGCTGTAAATGCATATGGATATCTAGCTCCAGAATACTTTAACAATGGGCTTGCAACGACCAAAAGTGATGTCTATGCATTTGGTGTTGTTCTTTTTGAGGTTATGTCAGGGAAGGAGGCCATCATTCAAACACAAGGTCCTGAAAAACGATCATTGGCATCTAGTATGTTGGCAATTCTTAGGAACTCAGCTGATTCCGTTAGCATGTCGAGCACAAGAAACCTCGTTGATCCTACTATGATGGATCTGTATCCCCATGATCGTGTGCACAAGATGGCCATGCTGGCAAAGCAATGTGTGGAAAAGGATCCCGTATTACGCCCTGACATGAAGCAAGTTGTGATTTCCCTCTCACAAATCCTGCTGTCCTCTGTTGAGTGGGAAGCTACTCTTGCCGGGAACAGCCAGGTATTCAGCGGTCTTGTCCAGGGAAGATAG 1956 0.4228 MNHSTKHRLMLLLLHIILLRLCCTSSYPTPTNCTDTSRVCTSFLAFKPKPNQTLPVIQSMFDVLPGEITVEDIGWNYLFIRKNCSCDAGMKKFVSNTTLTVKSNGGFVYDLVKEAYDGLALLPNTTHWARKDHGVIPLNLFCSCSSGLWNYLMSYIIRDGDSVESLASRFGVSMDSIETVNGIDNPGSFTVGSLYYIPLNSVPGELYHLKNDTSPVPVPSPSVDEISADQINHKDRVPHEWIVGGFGVGLALIILSIIVCVSLRSPNCLVEARNNAKNSAGKISNKFYVFGNPKLFCGCGKPVDQKQTDGETSNHQITVTKASSLVPDMLDMDRPVLFSYDEIFASTDGFSDSNLLGGCVYYGLLRDQEVAIKRITATKTKEFMSEIKVLCKVHHANLVELIGYAASHDDFFLIYEYAQKGSLSSHLHDTQNKGHSSLSWITRVQIALDAARALEYVHEHTKTRYVHQGIKTSNILLDASFRAKISDFGLAKLVGKTNEGETTASNAVNAYGYLAPEYFNNGLATTKSDVYAFGVVLFEVMSGKEAIIQTQGPEKRSLASSMLAILRNSADSVSMSSTRNLVDPTMMDLYPHDRVHKMAMLAKQCVEKDPVLRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01865 651 ProSiteProfiles Protein kinase domain profile. 303 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01865 651 FunFam PTI1-like tyrosine-protein kinase 3 418 637 - -
Phco10g01865 651 SUPERFAMILY LysM domain 153 198 IPR036779 -
Phco10g01865 651 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 46 645 IPR044812 GO:0019199|GO:0045087
Phco10g01865 651 Pfam LysM domain 155 187 IPR018392 -
Phco10g01865 651 ProSiteProfiles LysM domain profile. 153 197 IPR018392 -
Phco10g01865 651 SUPERFAMILY Protein kinase-like (PK-like) 325 623 IPR011009 -
Phco10g01865 651 SMART LysM_2 154 198 IPR018392 -
Phco10g01865 651 Gene3D Phosphorylase Kinase; domain 1 324 417 - -
Phco10g01865 651 Gene3D LysM domain 150 205 IPR036779 -
Phco10g01865 651 Pfam Protein tyrosine and serine/threonine kinase 363 621 IPR001245 GO:0004672|GO:0006468
Phco10g01865 651 Gene3D Transferase(Phosphotransferase) domain 1 419 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01865 Phco-Chr10 40843534 40848080 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phco10g01865 PK_Tyr_Ser-Thr 1.6e-43 CL0016