Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01834 ATGCAGGATCCAGCGTTATTCCAACCCTTGAAACCCCACTTTCCCGAACAAGAGCAACTCAAGTGTCCGCGTTGCGATTCCATCAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCGCAGCCTCGCCATTTCTGCAAAAATTGCAGAAGGTATTGGACCAAAGGAGGTGCATTGAGAAACATTCCCGTTGGGGGTGGAAGTAGAAAGAACGCTAAACGGTCATCCTCATCCACCACCAACACCAAACGCGCTTCCCCGTCACCTGCTCTAGAACCCGGCCCGACTCGTATTTGCCCTAACCCGGTTGCTGGGGGTGGGAGTTTAGGTTCTCTTTTGGCATCAGGTGGTCATTTGGGGAACCTCTTGGATGGTCTGAAATCAAGTGGGGCGAATCTGAAAGCTGTGCAAATGGAAGAATTTGGAGAGAATGTTAGATCGGGTCAAATGGCGGATCCGGGTTCTGGTCGGAACCCTGTGCTGGAGATTGAAAGAAATGGGAATGCAGAAAGTTTTCTTAGTATGCAAAATGGCGATTCAAGCTGTTGGAATGGTACTAATGGGTGGTCTAACCTTGCAATTTTCACTCCTGGGTCTAGCTATGAAAATTTATGA 618 0.4822 MQDPALFQPLKPHFPEQEQLKCPRCDSINTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNAKRSSSSTTNTKRASPSPALEPGPTRICPNPVAGGGSLGSLLASGGHLGNLLDGLKSSGANLKAVQMEEFGENVRSGQMADPGSGRNPVLEIERNGNAESFLSMQNGDSSCWNGTNGWSNLAIFTPGSSYENL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01834 205 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 107 IPR045174 GO:0003700|GO:0006355
Phco10g01834 205 MobiDBLite consensus disorder prediction 61 103 - -
Phco10g01834 205 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Phco10g01834 205 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Phco10g01834 205 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Phco10g01834 205 MobiDBLite consensus disorder prediction 71 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01834 Phco-Chr10 40604740 40605357 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco10g01834 zf-Dof 1.6e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01834 10 40604740 40605357 Phco10g01834 10 40604740 40605357 ECH
Phco10g01834 10 40604740 40605357 Phco1g00280 1 2031518 2032141 PCT