Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01827 ATGGTACTTGGTAAACCTGGGGATGCAACATCTTGCTTTCTGAGCCAAAAGAATGTTGGAACATCTGGATTTGAAGAACAGCAGAAGCGAGGAAAGCAAGAAATATGTTCTGATGACGCGGAAAAGGTCATTGTTGCCGTTAAGGCGTCAAAGGAAATTCCAAAAACTGCTCTTGTTTGGTCCCTAACTCATGTTGTGCAACCTGGTGATTGCATTACACTGCTAGTGGTTGTACCTTCACAAAGTTCGGGCAGAAGATTATGGGGTTTTCCAAGATTTGCCGGTGATTGTGCGAGTGGTCATAAGAAATCTTCTTCAGGATCATCAAGTTCAGAACAGAAGTGTGATATCACTGACTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCTAACAAGATAAATGTGAAGATTAAAATTGTTTCTGGATCACCCTGTGGAGCAGTGGCTGTGGAAGCCAAGAAAGCCCAAGCCAATTGGGTAGTTTTAGACAAACAGCTCAAACATGAGGAAAAACAATGTATGGAAGAGCTGCAGTGCAACATTGTGGTTATGAAGCGTTCACAACCAAAGGTACTCCGCTTGAATTTGGTTGGAACAAAAAAGAAGGATCTTGAAGAATTATGTTCACTACCTTCTGAACAAGATCAGTTGATTGGAAAACAAACTAAGAACAAGAATGATTCTTTAAATTCCTTAAAAGGTCCAGTTGTCACTCCATCTAGCAGCCCTGAGCTAGGGACACCGTTCACTGCAACTGAAGCTGGTACTTCATCGGTTTCAAGCTCTGATCAAGGAACTTCGCCATTTTTCATCTCTGAGATAAACAGTGAATCCAAAAAAGAGGAAACTATCAAAGAAAATCCAGAACTTGATGATTCTATATCAGACACAGACAGTGAAAACTTGTCCACTTCTTCAGCAAGCTTGAGATTCCAGCCATGGATCACTGATTTACTTCTGCATCAACGATCATCTCAACCTAAGGAAGAAAGAACCGAGAAATGTCATAATAGGACTCAATTGTCTACTACTAGAGCTTTGCTAGAAAAGTTCTCGAGACTTGATAGAGAAGCTGAAATTGAAATCTCAACCTATAAGACTGACTTAGATTTCAGTGGGAGTGTACGAGAAGCAATAGCATTATCTAGAAATACTCCACCCGGTCCTCCTCCCTTGTGTTCAGTCTGTCAACACAAGGCTCCTGTTTTTGGAAAACCTCCCCGATGGTTCAGCTATGCTGAATTGGAGCTTGCCACTGGTGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTACCAGATGGACAAGTTGTTGCTGTGAAGCAACATAAATTGGCCAGTTCTCAGGGTGATCTTGAATTCTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTTGTTATGTTGATTGGTTTCTGTATAGAGGATAAGAGAAGGCTATTGGTTTATGAGTACATATGCAATGGATCATTGGATTCTCATTTATATGGGAGACAACGAAAACCATTAGAATGGTCTGCCCGGCAAAAAGTTGCTGTTGGAGCTGCCCGAGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGAGGCCAAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCGAGGTGGCAGCCTGATGGTGACACAGGAGTGGAAACTAGAGTAATCGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATTACTGAAAAGGCTGATGTTTATTCATTTGGTGTGGTATTAGTGGAACTTGTTACAGGGCGAAAGGCTGTGGATCTCAATAGGCCAAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCACTGTTAGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGTTGGGAAGTCACTATTCGGAGCATGAGGTCTATTGCATGCTGCATGCTGCCTCATTGTGCATAAGGAAAGATCCTTATTCTAGACCACGCATGTCACAGGTTCTTCGAATACTGGATGGTGACACGGTTATGGACCCAAATTATGTTTCAACTCCCAGTTATGATGTGGGAAACCAGAGTGGCTGA 2160 0.4296 MVLGKPGDATSCFLSQKNVGTSGFEEQQKRGKQEICSDDAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGHKKSSSGSSSSEQKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAVEAKKAQANWVVLDKQLKHEEKQCMEELQCNIVVMKRSQPKVLRLNLVGTKKKDLEELCSLPSEQDQLIGKQTKNKNDSLNSLKGPVVTPSSSPELGTPFTATEAGTSSVSSSDQGTSPFFISEINSESKKEETIKENPELDDSISDTDSENLSTSSASLRFQPWITDLLLHQRSSQPKEERTEKCHNRTQLSTTRALLEKFSRLDREAEIEISTYKTDLDFSGSVREAIALSRNTPPGPPPLCSVCQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRKPLEWSARQKVAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRLGSHYSEHEVYCMLHAASLCIRKDPYSRPRMSQVLRILDGDTVMDPNYVSTPSYDVGNQSG 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01827 719 MobiDBLite consensus disorder prediction 279 296 - -
Phco10g01827 719 ProSiteProfiles Protein kinase domain profile. 426 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01827 719 Gene3D Phosphorylase Kinase; domain 1 397 501 - -
Phco10g01827 719 Pfam Protein tyrosine and serine/threonine kinase 430 695 IPR001245 GO:0004672|GO:0006468
Phco10g01827 719 ProSitePatterns Tyrosine protein kinases specific active-site signature. 547 559 IPR008266 GO:0004672|GO:0006468
Phco10g01827 719 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 502 705 - -
Phco10g01827 719 MobiDBLite consensus disorder prediction 223 278 - -
Phco10g01827 719 Gene3D Transferase(Phosphotransferase) domain 1 502 706 - -
Phco10g01827 719 SUPERFAMILY Protein kinase-like (PK-like) 410 705 IPR011009 -
Phco10g01827 719 PANTHER OS01G0750732 PROTEIN 177 704 - -
Phco10g01827 719 CDD STKc_IRAK 432 698 - -
Phco10g01827 719 FunFam Dual-specific kinase DSK1-like 34 189 - -
Phco10g01827 719 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 398 501 - -
Phco10g01827 719 MobiDBLite consensus disorder prediction 223 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01827 Phco-Chr10 40550560 40554740 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Phco10g01827 PK_Tyr_Ser-Thr 3e-41 CL0016