Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01807 ATGCATCACTCATTCTCCATGGCAACCAACCAAGTAAAAGAACCACCCAAAAGGCTCCAATACCCACTCGACTCTTCCTCCTACAAGATCCTCCACGAGATCGGCGCCGGCGTCAGCGCCGTCGTGTACAAAGCCATCTGCATCCCCATGAACTCCGCCGCGGTGGCAATCAAATCCATAGACCTCGACCGTTCCCGCCCCGACTTGGACGACGTTCGTCGCGAGGCCAAAACCCTGTCCCTCCTTTCTCACCCTAACATCCTCAAAGCACACTGCTCCTTCACCGTCGATCGCCGCCTCTGGGTGGTGATGCCCTTCATGGCCGCAGGATCTCTCCAATCCATCATCTCTCACTCCTACCCCAACGGCTTAACCGAACCCTGCATCGCGATGGTTCTCAGAGACATCCTTAATGCCCTCTCCTACCTCCATGGCCAGGGCCACCTCCACCGCGACATAAAAGCTGGCAACATCCTCGTTGACACAAACGGACAAGTGAAGCTGGCGGATTTCGGCGTGTCGGCTTCGATCTACGAGTCCTCGATGTGTTCCTCTCTCAAGTTCACCGACGTTGCCGGCACGCCGTATTGGATGGCTCCTGAGGTGATTCACTCGCACACGGGGTACAGTTTCAAGGCTGATATATGGTCCTTTGGGATAACCGCATTGGAGCTGGCTCATGGAAGGCCTCCTCTCTCTCACCTTCCACCTTCCAAGTCCATGATGCTCAAGATCACCAAGCGGTTTCGTTTCTCCGATTTGGATAAGTATAGAAAGGGGAACGGGAACAAGTTTTCGAAGGCGTTCAGGGACATGGTGGCTTCTTGTCTAGACCAAGATCCTTCCAAAAGGCCCACTGCTGATAAGTTGCTGAAACGCCCCTTTTTTAAAAACTGCAAGGGAACTGATTTTCTGGTGAAGAACGTACTCCAAGGGTTGCCCAGTGTGGAGAAAAGGTACAAGGAGAGCAAGGTTAGTGAGCATGAAGATGAGGGTGACCATGATGATGATGATGATGATGACGACCCCGCCATGCAGGTGAAGGAGAGAAGGATCAGTGGGTGGAACTTCAACCAAGAGGGGTTGGAGTTTGATCCTGTGTTTCCAAACGATGATGCGGGGGCTAAAGAGGTTGGGTTTGAAGGAGAAACGGTTATCCAAAAAATGGAGGAGCATGTTAATGTTGGTGGAAGTGTTGTAGGTGGTGGTGGTGTAAAGAGGGAAAAGGTGTTGGCGACTCTGAATGTGCTGAAAGGGAGCTTGGAACAAGAGCTATTGGAAGTGAAGTTTCTGGTGAAACTGATAGGAGGAGAGGAGGAGAGTGATCATGCAGTGGCTGCTGCTGATCATAATGAGGAGAAGGAGATTTCTAGGATGAGAGCTGCATTGGAAAATGAGAGGAAGAAGAACTTGCAGTTGGAGTTGCAGCTCCACACCTGCAAGCTTCGTCTTTCTTCTCCTCTCAATGTTTAA 1473 0.5139 MHHSFSMATNQVKEPPKRLQYPLDSSSYKILHEIGAGVSAVVYKAICIPMNSAAVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAAGSLQSIISHSYPNGLTEPCIAMVLRDILNALSYLHGQGHLHRDIKAGNILVDTNGQVKLADFGVSASIYESSMCSSLKFTDVAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDLDKYRKGNGNKFSKAFRDMVASCLDQDPSKRPTADKLLKRPFFKNCKGTDFLVKNVLQGLPSVEKRYKESKVSEHEDEGDHDDDDDDDDPAMQVKERRISGWNFNQEGLEFDPVFPNDDAGAKEVGFEGETVIQKMEEHVNVGGSVVGGGGVKREKVLATLNVLKGSLEQELLEVKFLVKLIGGEEESDHAVAAADHNEEKEISRMRAALENERKKNLQLELQLHTCKLRLSSPLNV 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01807 490 SMART serkin_6 28 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01807 490 ProSitePatterns Protein kinases ATP-binding region signature. 34 58 IPR017441 GO:0005524
Phco10g01807 490 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 20 438 IPR047173 GO:0043539
Phco10g01807 490 SUPERFAMILY Protein kinase-like (PK-like) 16 301 IPR011009 -
Phco10g01807 490 Gene3D Phosphorylase Kinase; domain 1 17 106 - -
Phco10g01807 490 FunFam Serine/threonine-protein kinase BLUS1 17 106 - -
Phco10g01807 490 Gene3D Transferase(Phosphotransferase) domain 1 110 346 - -
Phco10g01807 490 FunFam Serine/threonine-protein kinase BLUS1 110 341 - -
Phco10g01807 490 ProSiteProfiles Protein kinase domain profile. 28 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01807 490 Coils Coil 456 476 - -
Phco10g01807 490 Pfam Protein kinase domain 28 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01807 490 MobiDBLite consensus disorder prediction 319 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01807 Phco-Chr10 40426194 40427666 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Phco10g01807 Pkinase 8.4e-60 CL0016