Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01756 ATGCACTTAAGTCCTTACACTACTACTCCAAAGAAGCCATCACCACAATCCAACAACCACTCCAATAGCCGCCGCCACCACCACCATAATAACAACATTGTTCATGAAGCTGCAGCGTTAGATAACAACAACATGCATCGCAGCAACCAGAGCCACACATCCACGAGTCGTTCTTCGGACTCCACTGAGCCCAACGAAGATGGAAAATGGGCACCTAAGCTTCTCAGAGAGTGTGCAAAAGCAATATCAGAGAGAGACTCCACCAAAACACACCACCTTTTGTGGATGCTTAACGAGCTTGCTTCGCCCTACGGTGACTGCGATCAAAAACTCGCGTCTTACTTCTTGCAAGCCCTGTTCTGCAGAGCCACTGAGTCCGGTGAGAGATGCTACAAGACGCTTTCCTCCGTGGCTGAGAAGAGCCACTCGTTCGATTCCGCGAGGAGGTTGATTCTCAAGTTTCAAGAGGTGAGCCCTTGGACAACGTTCGGACACGTGGCCTCCAACGGGGCCATCTTGGAGGCCTTGGAGGGAGAGCCCAAACTCCACATCATCGATCTCAGCAACACGCTTTGCACGCAGTGGCCTACTTTGTTGGAAGCTTTGGCCACGCGAAACGACGAAACGCCACACCTCAAACTCACTGTGGTGGCGCTTGCGGGGTCGGTGATGAAGGAGGTTGGTCAACGGATGGAGAAGTTCGCGAGGCTCATGGGCGTGCCCTTTGAATTCAACGTGATTAGTGGCTTCCGGGATCTCACAAAAGAAGGCTTGGGGGTTCAGGAAGACGAAGCTATCGCCGTGAATTGCGTTGGGGCGTTGAGAAGAGTGGAGGTTGAAGAGAGGGAAAACTTGATTCGCGTGTTCAAGTCTCTTGGTCCTAAAGTGGTGACCGTTGTTGAGGAAGAAGCTGATTTTTGCAGCTCGAGGGAGGATTTCGTGAAGTGCTTCGAGGAGTGTCTGAAGTTCTACTCTCTCTACTTCGAGATGCTGGAGGAGAGTTTTCCCCCGACGAGCAACGAGAGGTTGATGTTGGAGAGGGAGTGTTCGAGGAGCATAGTTAGGGTTTTGGCATGCTGTGGTGGCGGTGATGATTTAGAAGATGATGGAGACGAGTTTGACTGTTGTGAGAGGAGGGAGAGAGGAACTCAGTGGTGTGAGAGGCTGAGGAATGCATTTTCGCCGGTAGGATTCAGCGATGATGTGGTGGATGACGTGAAAGCATTGCTGAAGAGGTACCAACCAGGGTGGTCACTTGTGGTGTCTCAGGGTGATGATCATCTCTCAGGGATTTACTTGACATGGAAGGAGGAACCAGTGGTTTGGGCTTCAGCATGGAAACCCTAG 1347 0.516 MHLSPYTTTPKKPSPQSNNHSNSRRHHHHNNNIVHEAAALDNNNMHRSNQSHTSTSRSSDSTEPNEDGKWAPKLLRECAKAISERDSTKTHHLLWMLNELASPYGDCDQKLASYFLQALFCRATESGERCYKTLSSVAEKSHSFDSARRLILKFQEVSPWTTFGHVASNGAILEALEGEPKLHIIDLSNTLCTQWPTLLEALATRNDETPHLKLTVVALAGSVMKEVGQRMEKFARLMGVPFEFNVISGFRDLTKEGLGVQEDEAIAVNCVGALRRVEVEERENLIRVFKSLGPKVVTVVEEEADFCSSREDFVKCFEECLKFYSLYFEMLEESFPPTSNERLMLERECSRSIVRVLACCGGGDDLEDDGDEFDCCERRERGTQWCERLRNAFSPVGFSDDVVDDVKALLKRYQPGWSLVVSQGDDHLSGIYLTWKEEPVVWASAWKP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01756 448 ProSiteProfiles GRAS family profile. 62 447 IPR005202 -
Phco10g01756 448 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 59 437 IPR005202 -
Phco10g01756 448 Pfam GRAS domain family 73 447 IPR005202 -
Phco10g01756 448 MobiDBLite consensus disorder prediction 1 20 - -
Phco10g01756 448 MobiDBLite consensus disorder prediction 1 70 - -
Phco10g01756 448 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01756 Phco-Chr10 40084344 40085690 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco10g01756 GRAS 7.6e-95 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00409 1 3207847 3209475 Phco10g01756 10 40084344 40085690 PCT