Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01740 ATGAATCTGCTCTCTCTGCACGGAACACAAAAACATAAAAGTAAATTTTCACAATCACGGTCGCTTCCTACGACAATCGAATTTGCGTCAGCCTCAATTCTCATGGAGTTTGGGATTGATGGCTCCATTAATGGTGAGACAGTAGGAAATGTTACTGTGGGGCAGATTAACAGTTGCAGCACAGCTGATGAAAACAAAGTAGGTTGCAGCTCTTTCAATCCTGCTTATAAACATGATCATGATGATAATATAACTCAAGATTCTTCTGGAGGGGACACAATCCCATCAGGAATTCCTGCAGTATCGGTTGTGTCAGCTGATGAGCCCTATGTGGGACAGGAGTTTGATTCTGAAGCTGCAGCACATGCATTCTATAATGCATATGCTACCCGTGTTGGATTCATCATACGTGTGAGTAAGCTCTCACGATCAAGGCGTGATGGATCTGCTATTGGACGGGCTCTTGTTTGCAACAGAGAAGGTTACAGAATGCCTGACAAACGTGAAAAGATTGTAAGGCAAAGGGCAGAGACTAGGGTTGGCTGCAGGGCAATGATTTTGGTGAGGAAAGTAAGTTCCGGTAAATGGGTTGTTACTAAGTTTATACAGGAGCACGCACATCCTTTGACACCTGGAAAAGGTAGAAGGGATTGCATTTACGAGCAATACCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAGTTGGCTATTGAGAAAAAACGGTCTGCAACCTATAAAAGGCATCTTGAATTGATATTTGAGCACATTGAAGAGCATAATGAAAGCCTTTCAAAGAAAATACAACACATAGTGGAGAGTGTGAAGGAGATGGAAACCAAAGAACAACAGAGTCAGAGATAG 867 0.4233 MNLLSLHGTQKHKSKFSQSRSLPTTIEFASASILMEFGIDGSINGETVGNVTVGQINSCSTADENKVGCSSFNPAYKHDHDDNITQDSSGGDTIPSGIPAVSVVSADEPYVGQEFDSEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFIQEHAHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELIFEHIEEHNESLSKKIQHIVESVKEMETKEQQSQR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01740 288 Coils Coil 262 282 - -
Phco10g01740 288 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 52 285 - -
Phco10g01740 288 Pfam FAR1 DNA-binding domain 124 210 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01740 Phco-Chr10 39960304 39962877 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco10g01740 FAR1 8.1e-30 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01740 10 39960304 39962877 Phco10g01740 10 39960304 39962877 ECH
Phco10g01740 10 39960304 39962877 Phco9g00606 9 4390102 4394644 PCT