Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01695 ATGGATTCTTCTGCCATCGTGGGTAGCTCAATTTCCGAGCCTCATCATGATATGGAATTCGAATCTCATGAAGCTGCATATACATTTTATAAAGAATATGCCAAGTCTGCAGGGTTTGGCACTGCTAAGCTGAGCAGTCGGCGATCTAGGGCATCCAAAGAATTTATTGATGCCAAATTTTCATGTATAAGATATGGTAATAAGCAGCAATCTGATGATGCAATTAATCCACGCCCTTCTCCAAAAATTGGTTGTAAAGCAAGCATGCATGTAAAGAGAAGGCAAGATGGTAAATGGTATGTCTACAGCTTTGTGAAGGAGCATAATCACGAACTTTTACCGGCTCAGGCTCATTTTTTTCGGAGTCACAGGAGTTCTGATCCACTAGGTAATGATGTTCGAATGCGTAGGCGGAAGACCTCAAATGCAGTTTCTAAATTATTTAGTGCATATCAGAATGTTGATTGCTTAGAGAACTTTGTGAAACATCAACATGATAAAGGACGAAGTTTGGTTCTAGAAGCAGGACATGCTCAATTACTTCTTGAGCTCTTCATGCACATGCAAGAAGAGAATCCAAAATTCTTCTATGCAGTTGATTTGAATGAAGAACATCGACTAAGAAATGTGTTCTGGGTTGATGCTAAAGGCTTGGAAGATTTTACATACTTTTCTGATGTTGTTTCTTTTGACACAACATATTTTACTAGCAAATATAAAATACCATTGGTACTTTTCGTTGGAGTAAACCATCACATTCAACCAACATTGCTTGGTTGTGCATTGATTGCTGATGAGACAATATTTACATATGCTTGGTTACTGCAAACATGGTTGATAGCAATGGGGGAACGAGCACCGCAAGTGCTTCTCACAGACCAAAACGATGCTATTAAAGCAGCTGTTGCCACTTTTCTTCCTGGAACACGCCATTGTTTTTGTTTGTGGCATATTTTGGAAAAGATACCAAAACAACTACAAATTTTAGGCGCATGGCATGATAGTTTTATGGAAAAATTTAACAAATGTATATACAGATCATGGACAGAGGAACAATTTGAAAAGAGATGGTGGAAGTTGGTTGACAGCTTTAGCCTTGGAGATGTTGAATGGGTTCGATCCTTATATGATGACCGTACATGTTGGGTGCCAACATTTATGAAAGATATTTCCTTTGCAGGCTTGTCTACCAGTTCTCGTTCTGAAAGTTTAAATTCATTGCTTGACAACTATATCCATGTTGATTCTTCTTTGAGAGAATTTATAGAACAATATAGAGTGATTCTTGAAGATAGGCATGAAGAGGAAGCCAAAGCAAATTTCGATGCTTGGCATGAAACACCTGACCTGAAGTCTCCTTCCCCTTTTGAAAAACAAATGCTGCTAGTTTACACACATGAAATTTTTAGAAAGTTCCAGGTTGAGGTGTTGGGTGCAGCTGCTTGCCATCTTAAGAAAGAAAGTGACGGTGTGACCACTACTTATACTGTGAAAGATTTTGAAAATAGTCAAAACTATTTGGTAGAATGGAACACATCCGCCTCAGATATATGCTGTTCATGTCGTTTGTTTGAATATAAAGGTTATCTCTGTAGACATGCTATTGTTGTTCTACAAATGTCTGGTGTTTTCAGCATTCCACCAAAGTATATATTGCAAAGATGGACAAATGCTGCTATGAGCAGGCACCCTATTGGTGAAAAATTGGAAGTGGTTCAATCAAAGGTGCGGCGATTCAATGATTTGTGTAGGCGGGCCATAATATTAGGCGAAGAAGGTTCTTTATCACCGGAAAGTTACTACATGGCTTTAGGTGCCATCAGTGAGGCACTAAAACAATGTGTAAATTTGAACAACCCTGTTGAAAATGGTATGAGACCTGATGCCTCGTGTACCCATGTTGTTTGTAATGTTGAGGAAGAATATCAATCTATTATTACATCTAACCATAAGGTCCCTGATCCGAAACTAAATATGGGAAAGAAGGCTGTGAGAACTGGTGTGGCTTGTAGGAATCAAGGAGGTGTCGAAAACAGTGGAGGTGATAAAGGAAAGGTATCTCTTGTCGAAGCAGGTAGTGGGAAAGATGGTTTTCAACATATGGAGCTTACTGATCCGAGATCACAGGGTGTCATGCCAATGCAGTTTCACAATGTGGTACCTGCTCTGTTCCATAATGTTTCTGCACCCTTTCACACTGCACCTTCACCTCATATGCACGAGAATCGTTAG 2232 0.3938 MDSSAIVGSSISEPHHDMEFESHEAAYTFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYVYSFVKEHNHELLPAQAHFFRSHRSSDPLGNDVRMRRRKTSNAVSKLFSAYQNVDCLENFVKHQHDKGRSLVLEAGHAQLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDAKGLEDFTYFSDVVSFDTTYFTSKYKIPLVLFVGVNHHIQPTLLGCALIADETIFTYAWLLQTWLIAMGERAPQVLLTDQNDAIKAAVATFLPGTRHCFCLWHILEKIPKQLQILGAWHDSFMEKFNKCIYRSWTEEQFEKRWWKLVDSFSLGDVEWVRSLYDDRTCWVPTFMKDISFAGLSTSSRSESLNSLLDNYIHVDSSLREFIEQYRVILEDRHEEEAKANFDAWHETPDLKSPSPFEKQMLLVYTHEIFRKFQVEVLGAAACHLKKESDGVTTTYTVKDFENSQNYLVEWNTSASDICCSCRLFEYKGYLCRHAIVVLQMSGVFSIPPKYILQRWTNAAMSRHPIGEKLEVVQSKVRRFNDLCRRAIILGEEGSLSPESYYMALGAISEALKQCVNLNNPVENGMRPDASCTHVVCNVEEEYQSIITSNHKVPDPKLNMGKKAVRTGVACRNQGGVENSGGDKGKVSLVEAGSGKDGFQHMELTDPRSQGVMPMQFHNVVPALFHNVSAPFHTAPSPHMHENR 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01695 743 SMART 26again6 517 544 IPR006564 GO:0008270
Phco10g01695 743 Pfam FAR1 DNA-binding domain 28 114 IPR004330 -
Phco10g01695 743 Pfam MULE transposase domain 227 320 IPR018289 -
Phco10g01695 743 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 615 IPR031052 GO:0006355
Phco10g01695 743 Pfam SWIM zinc finger 508 540 IPR007527 GO:0008270
Phco10g01695 743 ProSiteProfiles Zinc finger SWIM-type profile. 506 542 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01695 Phco-Chr10 39456134 39459339 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco10g01695 MULE 3.1e-25 CL0219