Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01691 ATGGCAGAGGAACTTGACCTGGACAACCTGAAGGCACTGAAAGTTTTAGGCAAAGGAGCCATGGGCACCGTGTTTCTCGTGCAACACAACTCCTACCACGTCGCACTCAAAGTCGTTGACAAATCATCATCCCTCCACGACGGTGCTCGCCGCGCCCACTGGGAAATCAGCGTTCTCTCTCGCTTATCCCACCCCTTCCTCCCCACCCTATTGGGTTCCTTCGAGTCCAACAACTTAATGGGCTGGGCAGTCCCCTACTGCCCCGGCGGCGACCTCAACCACCTCCGCTACCGCCAAACAGACCACGTATTCTCCCCTGCCGTCGTCCGCTTCTACCTCGCCGAGATCCTCTGCGCCCTCCACCACCTCCACTCCATGCACATCGCATACCGCGACCTCAAACCCGAAAACGTCCTCATCCAACAATCTGGCCACGTCACCCTCACCGACTTCGACCTCTCTCGAACCCTCTCTCCTACCAAAACCAACACCTCTCCCTCCAAATCCCACATTCCCGACACCGCTCCACGCAAACCCCGCCGCAACTTTCGCTGGGCCCCACTCACCAAGGCCCCCAAGTCCGCCCGAGTCACCCCCGCCGCTCGCCGCGCCGTGCTGAGCTTCGAGCACTCGAAGTCGTTCGTGGGCACCGAGGAGTACATCGCGCCGGAGGTCCTCCGAGGCGAGGGGCACGGCTTCGCCGTCGACTGGTGGGCTCTCGGCGTCCTCGCCCACGAGATGGTCTACGGAACGACGCCGTTCAAGGGGAAGAATCGCAAGGAAACTTTTCGCAACGTGTTGTTGAAGACGCCCGAGTTTGTTGGGAAGAAAACAGCGTTGACGGACCTAATCTCTCAGCTGCTCGAAAAGGACCCCTCCAAGCGTTTGGGTTATGTTCGCGGCGCCACCGAGATCAAGGAGCACGAGTTCTTCAGAGGTGTTAAGTGGGACCTACTAACGGAGGTTATGCGGCCGCCGTTTATTCCTTCAAGAGACGATGTCACGAAGCCTTTCGCCGATGGACTCGACATAAGGGGATACTTTCAGAGCTTGAAATCTCCGCCGTCTTTGCCCCCTTCGCCGTTACGGTCACCGTCGTTTGAGTTTCAGAAGAATGTTTCTTCACCGGAATTCTGA 1137 0.5814 MAEELDLDNLKALKVLGKGAMGTVFLVQHNSYHVALKVVDKSSSLHDGARRAHWEISVLSRLSHPFLPTLLGSFESNNLMGWAVPYCPGGDLNHLRYRQTDHVFSPAVVRFYLAEILCALHHLHSMHIAYRDLKPENVLIQQSGHVTLTDFDLSRTLSPTKTNTSPSKSHIPDTAPRKPRRNFRWAPLTKAPKSARVTPAARRAVLSFEHSKSFVGTEEYIAPEVLRGEGHGFAVDWWALGVLAHEMVYGTTPFKGKNRKETFRNVLLKTPEFVGKKTALTDLISQLLEKDPSKRLGYVRGATEIKEHEFFRGVKWDLLTEVMRPPFIPSRDDVTKPFADGLDIRGYFQSLKSPPSLPPSPLRSPSFEFQKNVSSPEF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01691 378 Gene3D Phosphorylase Kinase; domain 1 10 90 - -
Phco10g01691 378 FunFam Serine/threonine-protein kinase OXI1 209 330 - -
Phco10g01691 378 MobiDBLite consensus disorder prediction 157 182 - -
Phco10g01691 378 Gene3D Transferase(Phosphotransferase) domain 1 208 330 - -
Phco10g01691 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Phco10g01691 378 ProSitePatterns Protein kinases ATP-binding region signature. 16 37 IPR017441 GO:0005524
Phco10g01691 378 ProSiteProfiles Protein kinase domain profile. 10 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01691 378 SUPERFAMILY Protein kinase-like (PK-like) 7 362 IPR011009 -
Phco10g01691 378 Gene3D Transferase(Phosphotransferase) domain 1 91 163 - -
Phco10g01691 378 MobiDBLite consensus disorder prediction 363 378 - -
Phco10g01691 378 PANTHER FLIPPASE KINASE 1-RELATED 4 332 - -
Phco10g01691 378 SMART serkin_6 10 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01691 378 MobiDBLite consensus disorder prediction 351 378 - -
Phco10g01691 378 ProSiteProfiles AGC-kinase C-terminal domain profile. 312 378 IPR000961 GO:0004674|GO:0005524|GO:0006468
Phco10g01691 378 MobiDBLite consensus disorder prediction 157 171 - -
Phco10g01691 378 FunFam Serine/threonine-protein kinase OXI1 91 159 - -
Phco10g01691 378 Pfam Protein kinase domain 12 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01691 378 Pfam Protein kinase domain 211 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01691 Phco-Chr10 39428598 39429734 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phco10g01691 Pkinase 3.6e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01691 10 39428598 39429734 Phco10g01691 10 39428598 39429734 ECH
Phco10g01691 10 39428598 39429734 Phco9g00650 9 4805564 4806823 PCT