Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01581 ATGATTGATTGGAGAAATATTGGTTTTTTTCTGTGTGCTTTATCAATCTTCCCCCTTGTATGTTTTTCTGCCACCTTTGTTCCAGTAGATAATTATCTTATAGACTGTGGAGCATCTGCAAGTACTACAGTAGGCAGGCGCAATTTCACAGCAGATAGTTTGTCCAAGGATCTGCTTTCTACACAAGAAGATATTCTTGCCACTTCCCCCTTAAAAGCAAGTACTTCTTCTTCCTCTGATGATTCGGCTCTCTATCAAACTGCAAGAATCTTCAGTCGATCCTCAAAGTACACCTTTCCAATTAAGCAAAAGGGAAGACACTGGATCCGTCTATATTTCTTTCCATTTACTTATGAAAAGTACAATTTGAGTGCTGCAAATTTCACTGTTGCCACACAAGACCATGTCCTTTTCAGTAGCTCCAACATGCAGAAAGATCCTGTGATGAAGGAGTACTCTGTGAATGTGACCTCAGACAACCTTGTTATCACCTTTGCCCCTTCTGGCAATTCCACTGCCTTTGTGAATGCCATTGAGGTTGTTTCTGCCCCCGATGACCTCATTGTTAACGATTTTTCCGTCTTGGATCCGTCGTTAACCTTATCTGAGCTGGTGACGCAAGCACTGGAGACAGTTTGGAGGGTTAACATGGGTGGTCCAACTGTGACCCCTATGAATGACACCCTTCAAAGAACTTGGATTCCAGATCAAAGGTTCCTTTTGGAACCTAACCTTGCCACATATTTTTCTAATATTGATGCTGTTCATTATGAGAAAGATGGTTCAACAACAGAAAACACCGCTCCACCTACTGTTTATGGTACCCTCGCACAGATGAACTCAACCTTTGAACCCCGAAGTAATTTCAATGTGACATGGAATTTTGATGTGAGTCCTGGATTTCAGTACCTTGTTCGATTTCACTTCTGTGATTTGGTCAGTAAAAGTCTCAATGTACTCTACTTCAATGTTTATATTGACTCCAAGATGGCTGCTGCTAGTGTTGATCTCAGTCTTCATGGTAATAATGTTTTGGGTGTTCCATATCATAATAATTTGGTCACACCGTTGGCTGTCAGCAATACACTTCGTGTAAGTATTGGTCCTTCTGATTTAAATAAGGATTTCCCTAATGCTATTTTGAATGGGCTTGAAATCATGAAAATGAACAATTCTATGGGCAGTCTTATCACAGGAGCAGGACCTGTGGCTATTAGTCCAGGTTCAAGTTCTAAGAGCACTGGCATGATTGTGGGTGTGATTGTTGGGGTAGTTGGTGCGGTTGTCTTGGCTGGAGTTTTCTTTGTATTATGCATGAGAAGACGAAAGTTGGCTCGGCAAAGGAAGTCAAAGACATGGGTTCCTTTATCCATCAATGATGGAACTACTTCTCATACCATGGGAAGTAAATACTCTAATGGCACAACACTAAGTGCTGCTTCAAACTATGAGTATCGCGTGCCTTTTCTTGCAGTTCAGGAGGCCACAAACAACTTTGATGAGAGTTGGGTTATTGGGATAGGTGGTTTTGGAAAAGTGTACAAAGGAGAGTTAAGTGATGGCACTAAAGTGGCAGTAAAGAGGGGGAATCCACGGTCCCAGCAGGGGCTTGCAGAATTCAGAACTGAAATTGAAATGCTGTCTCAGTTCCGCCATCGCCATCTGGTGTCTTTGATTGGTTATTGTGATGAAAGGAATGAAATGATCTTGATATATGAATATATGGAGAAAGGAACACTCAAGAGTCATTTATATGGCTCAGGTCTGCCTAGCTTAAGCTGGAAGGAGAGGCTTGAGATATGCATTGGATCAGCCAGAGGACTTCATTATCTTCACACTGGCTATGCTAAAGCTGTTATTCACCGGGATGTGAAGTCTGCAAATATCCTACTTGATGAGAAACTAATGGCTAAAGTCGCTGATTTTGGACTATCAAAGACGGGGCCTGAAATTGACCAGACACATGTGAGCACAGCTGTCAAAGGTAGTTTTGGGTACCTCGATCCAGAGTATTTCAGGAGGCAACAACTAACAGAAAAGTCAGATGTGTATTCATTTGGGGTAGTCCTGTTTGAAGTTCTTTGTGCAAGGCCTGTCATAGATCCAACACTTCCTAGGGAAATGGTAAACTTGGCAGAATGGGCAATGAAATGGCAGAAGAAAGGACAATTGGAGCAAATCATAGATCAAACACTTGCGGGCAAAATCAGGCCGGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAGAAATGCTTGGCTGACTATGGTGTTGACAGACCTTCTATGGGAGATGTCTTGTGGAACTTGGAGTATGCTCTCCAACTTCAAGAGGCTGTGGTTCAAGGTGATCCTGAAGAAAACAGCACTAATATGATTGGTGAACTCTCTCCACAGATCAACAATTTCAGCCAGGATGCAAGTGCTTCAACTGCACAATTCGAAGGCACGAGTCTGGATGATCTGTCTGGTGTTTCTATGAGTAGGGTATTCTCACAATTGGTGAAGTCTGAGGGTAGATAG 2520 0.4242 MIDWRNIGFFLCALSIFPLVCFSATFVPVDNYLIDCGASASTTVGRRNFTADSLSKDLLSTQEDILATSPLKASTSSSSDDSALYQTARIFSRSSKYTFPIKQKGRHWIRLYFFPFTYEKYNLSAANFTVATQDHVLFSSSNMQKDPVMKEYSVNVTSDNLVITFAPSGNSTAFVNAIEVVSAPDDLIVNDFSVLDPSLTLSELVTQALETVWRVNMGGPTVTPMNDTLQRTWIPDQRFLLEPNLATYFSNIDAVHYEKDGSTTENTAPPTVYGTLAQMNSTFEPRSNFNVTWNFDVSPGFQYLVRFHFCDLVSKSLNVLYFNVYIDSKMAAASVDLSLHGNNVLGVPYHNNLVTPLAVSNTLRVSIGPSDLNKDFPNAILNGLEIMKMNNSMGSLITGAGPVAISPGSSSKSTGMIVGVIVGVVGAVVLAGVFFVLCMRRRKLARQRKSKTWVPLSINDGTTSHTMGSKYSNGTTLSAASNYEYRVPFLAVQEATNNFDESWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDEKLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLEQIIDQTLAGKIRPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFSQDASASTAQFEGTSLDDLSGVSMSRVFSQLVKSEGR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01581 839 FunFam Receptor-like protein kinase FERONIA 208 391 - -
Phco10g01581 839 FunFam Putative receptor-like protein kinase 31 184 - -
Phco10g01581 839 SUPERFAMILY Protein kinase-like (PK-like) 476 770 IPR011009 -
Phco10g01581 839 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01581 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Phco10g01581 839 CDD STKc_IRAK 505 770 - -
Phco10g01581 839 FunFam Receptor-like protein kinase FERONIA 575 790 - -
Phco10g01581 839 PANTHER OS07G0166700 PROTEIN 486 776 IPR045272 GO:0004714|GO:0006468
Phco10g01581 839 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Phco10g01581 839 Gene3D Transferase(Phosphotransferase) domain 1 575 792 - -
Phco10g01581 839 Gene3D Phosphorylase Kinase; domain 1 461 574 - -
Phco10g01581 839 FunFam receptor-like protein kinase FERONIA 463 574 - -
Phco10g01581 839 Gene3D - 207 391 - -
Phco10g01581 839 Gene3D - 31 184 - -
Phco10g01581 839 SMART serkin_6 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01581 839 Pfam Protein tyrosine and serine/threonine kinase 504 711 IPR001245 GO:0004672|GO:0006468
Phco10g01581 839 Pfam Malectin-like domain 34 389 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01581 Phco-Chr10 38613051 38615570 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco10g01581 Malectin_like 1.1e-38 CL0202