Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01577 ATGTTTGAACACTCCACCACTGCATCACCTTCTTCTCTCTTCCCTCAACTCACTCACTTCGACACCCTCTCCCAACTCAACAACTTCGACACCAGTTACTGCTACTACAACAACAACAACAGTAGTAGTAACTGTAGCAGTGGCTATAGCAGTTATGGTGGGTCTCCCACTTCTGTGGCCACTCCCAACTTTATGCAGAGGAGTGTCAGCAGTAATTCCTTCAACTACAACAACAATGGCACCCACCACCCTCTTTCTGCTCTCTTCGCCGAATTGCTCGACTCCCATGATGCTCCAGTTAGGAGAGTTTGCAGTACCGGGGATCTCCAGGGGATTAATGGAGCTCAACATAATCACCTCTCTGATAGTCCGTTATCAAGCGAAAGTAGTATGATCATAGAAGGTATGAACAGAGCCTGTAGATATAGCCCAGAGGAGAAGAAGGTGAGAATTGAGAGATACAGAAGCAAGAGGAACCAGAGAAATTTCAACAAGAAAATTAAGTATGCTTGCAGGAAAACATTGGCAGACAGCAGGCCACGCATCAGAGGAAGGTTTGCAAGGAATGATGAAATTGACAAGAACACTTCAATTCAGTGGAGCCAAACTGGTGGAGATGAAGAGGAAGAAGAAGATGAGAATTGGTTCACCATCTTAGATTCCTTAGTTGCTGCAAATTTTGGTCAGGAGTCTCAAGGCAGTTGTTCCTCCCATGGTGTCTTCTATTAG 729 0.4527 MFEHSTTASPSSLFPQLTHFDTLSQLNNFDTSYCYYNNNNSSSNCSSGYSSYGGSPTSVATPNFMQRSVSSNSFNYNNNGTHHPLSALFAELLDSHDAPVRRVCSTGDLQGINGAQHNHLSDSPLSSESSMIIEGMNRACRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKNTSIQWSQTGGDEEEEEDENWFTILDSLVAANFGQESQGSCSSHGVFY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01577 242 ProSiteProfiles CCT domain profile. 147 189 IPR010402 GO:0005515
Phco10g01577 242 Pfam CCT motif 149 189 IPR010402 GO:0005515
Phco10g01577 242 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 61 217 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01577 Phco-Chr10 38588888 38590978 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco10g01577 CCT 8.6e-18 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01577 10 38588888 38590978 Phco10g01577 10 38588888 38590978 ECH
Phco10g01577 10 38588888 38590978 Phco9g00786 9 5917399 5920416 PCT