Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco10g01571 | ATGGAGCCGTCAGAAAAGTCGCCGAAAAAAGTATCATCAGTCAGATCATCATTTCCGAGAGATCCACGTGGCTCACTCGAAGTGTTCAACCCAAACACTTCAACTGCAACGAACTCGCGCGTGCGTTCACAGCCGCTTTGGAAATCGTGGACGGAGTCGGAGGAATCGCGGAATGAAATCGCCGCCACGTCGTGGATGGCGATTAATCCGGCGCCGCAAGCAGAAGTAGAATGCGGCGCGGCGGCGCAGAGGGCTGCGGAGTGGGGGTTGGTGCTCCGAACCGACACCGAGACCGGCAAGCCGCAGGGCGTGGCGGCGAGGAACTCCGGCGGCGAGGAACCTAACGTTGCCAAACTTGCCGCCGCTGCTTCGTCTTCCAGGAAGAACTCTCAGAACTCCGCCAGAACCTCCGGCGACTCCTCCTCTGACGGCGGCGGCGACGTTGTTGGTGGAATTCCGAGAATTTCGGAGGACGTGATGGGGGCTTTGTCGGCTTTCCAACAAACTTTCGTGGTTTCGGATGCTACTAAACCCGATTGCCCGATCCTGTATGCGAGTGCCGGGTTCTTTAAAATGACGGGTTATACGTCCAAGGAAGTTATTGGCAGAAACTGTCGGTTTTTACAGGGTGCGGAGACTGATTGTGGTGATGTGGCAAAGATAAGGGAAGCATTGGAAGCTGGGAAAATTTACTGCGGAAGGCTATTAAATTACAAGAAGGATGGGACACCTTTCTGGAACCTTCTTACCATTTCACCAATCAAGGATGAAGATGGCAAGGTCCTCAAATTTATCGGAATGTTAGTGGAGGTTAGCAAGCACACGGAGGGGTTGAAGGAGAAGACTCTACGTCCCAATGGATTACCGGAATCCTTGATTCGATACGATGCACGCCAGAAAGAGAAGGCTACAAACTCAGTATCTGAGTTGTTGCAGATCATGAAGCGCCCCCGAGCATTGAGTGAATCCGCAGGTCGGCCCTCCATTAAAAAATCAGGATATGCTGAGGAAGAAAAACAATCACTACATGAAGAAGAAGAAGAAGAGGAGAAGGAGGAGAAAGAGAAAGCAAAAAAAACTTTAAGAAGAAAATCCGAGAGTGAGGCTTCATTAGGACGCAAATCAGAAGGAGGAAATAAAATTTCCATGCAACGAATCAGTGAAGTGCCTGAAAATAAACTGAAAAACTCTCAGCGCCGTTCCTTCATGGGGTTCAGGCGGAAAAGTGAGTCCAACGATGAAAGCATGGAAAATGAAGTTATTGAGGATGTCAGCTCTGATAGTGAGGATGGTGAGAGGCCTGATAGTTTTGATGTAGATGACAAAGAAAAGCAGAGGGAAAAGAGAAAAGGTCTTGATCTTGCTACCACGCTTGAACGTATTGAGAAAAACTTTGTCATTACTGATCCAAGGCTTCCAGACAATCCAATAATCTTTGCATCGGATAGCTTCTTAGAGCTTACAGAATATAGTCGTGAAGAAATCTTGGGAAGGAATTGCAGGTTTCTACAAGGACCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAACCAAACAGAAGTTACCGTGCAACTGATTAATTATACAAAGAGTGGAAAGAAGTTCTGGAACCTGTTTCATTTGCAACCTATGCGTGATCAGAAGGGAGAAGTGCAGTATTTTATTGGTGTTCAACTAGATGGTAGTCAACATGTAGAGCCTCTTCAGAACTGCATCGCAGAAGATACTGCAAAGGAGGGAGAACAAATGGTCAAACAAACTGCAGAAAATGTTGATGTGGCAGTGAGAGATCTTCCGGATGCTAATATGAAACCAGACGATTTATGGACAAATCATTCAAAAGCAGTTCACCCCAAACCTCATAGGAAGGATAACCCTGCATGGAAAGCTATCCAGAAGGTCCTAGAAAGTGGAGAACAGATAAGCTTAAAGCACTTTAGGCCGATTAAACCTTTAGGATCAGGAGATACTGGCAGTGTGCATCTGGTGGAGCTACGTGGAACAGGTCAATATTTTGCCATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGTTTGCGCAGAGAGAGAAATTCTTGACCAGCTGGACCACCCATTTCTACCTGCATTATATGCTTCGTTCCAGACCAAATCACACGTTTGTTTGATAACTGATTATTGTCCTGGCGGAGAATTATTCATGCTTCTTGACCAGCAACCAACTAAGGTTCTAAAGGAAGACGCCGTGAGATTTTATGCAGCTGAGGTAGTGATTGCATTGGAGTACCTTCACTGCCAAGGGATAATATATCGAGATTTGAAGCCTGAAAATGTGTTAATCCAGAGCAATGGGCATGTGTCCCTAACAGATTTTGATTTGTCATGTTTAACTTCTAGTAAGCCACAGCTTTTAATTCCAGCTTCCAATTCAAAGAAGAAGAAGAAGAAGAAACAGAGAAGTCAGGAGGTTCCTGTGTTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACGGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCTGGTCACACTAGTGCTGTTGATTGGTGGGCGCTAGGTATTCTTGTATATGAAATGTTTTATGGATATACTCCATTCCGGGGGAAGACAAGACAAAAAACGTTTGCAAATATTCTTCACAAGGATCTCAAATTTCCCAAAAGTAAACCAGTAAGTCTCCAGGGAAAGCAGCTAATTTATTGGTTGTTGCAGAGAGATCCCAAAGAAAGATTGGGGTCACGTGAAGGAGCAAATGAAATTAAACGTCATCCTTTCTTCAAGGGTGTCAATTGGGCACTAGTTCGTTGCATGAAACCTCCTCAACTTGATGCTCCTCTCTTACCGAAAACTGAAGAAGAAAAAGAAGCCAGAGATATAGATCCTGGACTAGAAGATTTGCAGACAAATGTTTTCTGA | 2961 | 0.4509 | MEPSEKSPKKVSSVRSSFPRDPRGSLEVFNPNTSTATNSRVRSQPLWKSWTESEESRNEIAATSWMAINPAPQAEVECGAAAQRAAEWGLVLRTDTETGKPQGVAARNSGGEEPNVAKLAAAASSSRKNSQNSARTSGDSSSDGGGDVVGGIPRISEDVMGALSAFQQTFVVSDATKPDCPILYASAGFFKMTGYTSKEVIGRNCRFLQGAETDCGDVAKIREALEAGKIYCGRLLNYKKDGTPFWNLLTISPIKDEDGKVLKFIGMLVEVSKHTEGLKEKTLRPNGLPESLIRYDARQKEKATNSVSELLQIMKRPRALSESAGRPSIKKSGYAEEEKQSLHEEEEEEEKEEKEKAKKTLRRKSESEASLGRKSEGGNKISMQRISEVPENKLKNSQRRSFMGFRRKSESNDESMENEVIEDVSSDSEDGERPDSFDVDDKEKQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLQNCIAEDTAKEGEQMVKQTAENVDVAVRDLPDANMKPDDLWTNHSKAVHPKPHRKDNPAWKAIQKVLESGEQISLKHFRPIKPLGSGDTGSVHLVELRGTGQYFAMKAMDKGVMLNRNKVHRVCAEREILDQLDHPFLPALYASFQTKSHVCLITDYCPGGELFMLLDQQPTKVLKEDAVRFYAAEVVIALEYLHCQGIIYRDLKPENVLIQSNGHVSLTDFDLSCLTSSKPQLLIPASNSKKKKKKKQRSQEVPVFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILVYEMFYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLQGKQLIYWLLQRDPKERLGSREGANEIKRHPFFKGVNWALVRCMKPPQLDAPLLPKTEEEKEARDIDPGLEDLQTNVF | 986 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco10g01571 | 986 | CDD | STKc_phototropin_like | 649 | 964 | - | - | |
Phco10g01571 | 986 | SMART | serkin_6 | 651 | 941 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phco10g01571 | 986 | Pfam | PAS domain | 473 | 565 | IPR000014 | - | |
Phco10g01571 | 986 | Pfam | PAS domain | 176 | 272 | IPR000014 | - | |
Phco10g01571 | 986 | FunFam | Putative LOV domain-containing protein | 169 | 325 | - | - | |
Phco10g01571 | 986 | CDD | PAS | 182 | 271 | IPR000014 | - | |
Phco10g01571 | 986 | MobiDBLite | consensus disorder prediction | 318 | 450 | - | - | |
Phco10g01571 | 986 | MobiDBLite | consensus disorder prediction | 94 | 151 | - | - | |
Phco10g01571 | 986 | Gene3D | Transferase(Phosphotransferase) domain 1 | 735 | 964 | - | - | |
Phco10g01571 | 986 | ProSiteProfiles | Protein kinase domain profile. | 651 | 941 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phco10g01571 | 986 | Gene3D | Phosphorylase Kinase; domain 1 | 650 | 974 | - | - | |
Phco10g01571 | 986 | MobiDBLite | consensus disorder prediction | 380 | 399 | - | - | |
Phco10g01571 | 986 | ProSitePatterns | Protein kinases ATP-binding region signature. | 657 | 680 | IPR017441 | GO:0005524 | |
Phco10g01571 | 986 | MobiDBLite | consensus disorder prediction | 352 | 373 | - | - | |
Phco10g01571 | 986 | MobiDBLite | consensus disorder prediction | 609 | 629 | - | - | |
Phco10g01571 | 986 | MobiDBLite | consensus disorder prediction | 430 | 450 | - | - | |
Phco10g01571 | 986 | Pfam | Protein kinase domain | 653 | 941 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Phco10g01571 | 986 | SMART | pac_2 | 527 | 569 | IPR001610 | - | |
Phco10g01571 | 986 | SMART | pac_2 | 232 | 274 | IPR001610 | - | |
Phco10g01571 | 986 | FunFam | LOV domain-containing protein | 650 | 734 | - | - | |
Phco10g01571 | 986 | ProSiteProfiles | PAS repeat profile. | 450 | 523 | IPR000014 | - | |
Phco10g01571 | 986 | PANTHER | FLIPPASE KINASE 1-RELATED | 351 | 959 | - | - | |
Phco10g01571 | 986 | SUPERFAMILY | Protein kinase-like (PK-like) | 632 | 961 | IPR011009 | - | |
Phco10g01571 | 986 | MobiDBLite | consensus disorder prediction | 27 | 57 | - | - | |
Phco10g01571 | 986 | ProSiteProfiles | PAC domain profile. | 524 | 578 | IPR000700 | - | |
Phco10g01571 | 986 | MobiDBLite | consensus disorder prediction | 122 | 143 | - | - | |
Phco10g01571 | 986 | Gene3D | PAS domain | 169 | 327 | - | - | |
Phco10g01571 | 986 | SMART | pas_2 | 452 | 521 | IPR000014 | - | |
Phco10g01571 | 986 | SMART | pas_2 | 157 | 226 | IPR000014 | - | |
Phco10g01571 | 986 | FunFam | Putative LOV domain-containing protein | 735 | 953 | - | - | |
Phco10g01571 | 986 | NCBIfam | PAS domain S-box protein | 182 | 275 | IPR000014 | - | |
Phco10g01571 | 986 | NCBIfam | PAS domain S-box protein | 475 | 565 | IPR000014 | - | |
Phco10g01571 | 986 | ProSiteProfiles | PAC domain profile. | 229 | 283 | IPR000700 | - | |
Phco10g01571 | 986 | Coils | Coil | 334 | 367 | - | - | |
Phco10g01571 | 986 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Phco10g01571 | 986 | FunFam | LOV domain-containing protein | 439 | 603 | - | - | |
Phco10g01571 | 986 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 176 | 268 | IPR035965 | - | |
Phco10g01571 | 986 | Gene3D | PAS domain | 438 | 603 | - | - | |
Phco10g01571 | 986 | ProSiteProfiles | PAS repeat profile. | 155 | 204 | IPR000014 | - | |
Phco10g01571 | 986 | MobiDBLite | consensus disorder prediction | 615 | 629 | - | - | |
Phco10g01571 | 986 | CDD | PAS | 465 | 565 | IPR000014 | - | |
Phco10g01571 | 986 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 772 | 784 | IPR008271 | GO:0004672|GO:0006468 | |
Phco10g01571 | 986 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 466 | 565 | IPR035965 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco10g01571 | Phco-Chr10 | 38534581 | 38544721 | Dispersed/Wgd |