LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco10g01524	ATGTTTACAATGCGATTGCTATGGGGGCTAAGGCTGCCCCTACTCATACTGATTCAACTTTTATTTCCCAACAGATCAACCTACAAATTATACGCTGAGGCTTTGATCACTTTCAAAGGTTCGCTTGGAGGTCCACAGCAATTAGGATGCAGCATTGTGAAATATCCATGTCAAATGCAATGGCCTTGTCTTGACTGCTATAAACTAAAAGATCCAGGTGGAGTAACAGCAAAGATAGATGGGAATAATGACATTCCAACACTTACACCTCTTCCAGAACCGCAAGATAGAAAACCAGGTGGAAGAAAGAGTTCTGCCATAATTGGCAGCGCTATTGCTGCCTTAGTTGTCCTTGTAATTGTGGTTACTGTCTATATCTGCTTGATGCGTGTTAAAAAATCTATGAGGCAAACATCTGAGGTTGCTTCTTCTATGCCATCTCCCACTGTTGAGATGGGAAGAGTCAACACGCAGCATGTTACTGCTTTCTCTCCACAAAACACAAGGCAGTTAACAATTTTGGAACTGGAACAAGCTACACGAAATTTCAGTCATAATAATATCATTGGTGAAGGTGGATTTGGTGTTGTATACAAGGGCTTGCTTCAAGATGGTTCTATTGTGGCTATAAAAAGGCGTCTATTTGCTCTGACACAAGATTTCGTTCTCGAGGTGAAACAGATAGCTCATATTCACCACATCCATCTTGCCAAGCTCATAGGCTATTATGAAGATAGCCATCAACAATTACTTGTATATGAATATCTCCCGAACAGCAATGTAGGGAGTCACCTATATGATAGTGAAGGTTTACCTGTTGGAAGGTTAAACTTGTGGCGAAGATTGTCTATTGCTTTAGGCGCATCCAAAGGAGTGGAACATCTTCACAGTTTGGTTCCTCCTTTGGTTCACACAAACTTTAGAACTAGCAATGTTCTGTTAGATGAAAATTATACTGCCAAGGTTTCTGATTATGGATTCTGCAAATTGCAAGCACAAGTTGATCAGGCAGGCTCGTCTTCAAATGTAGACTGTTTTCTTGATCCAGAGTTGAACTTTCCACAAAACTATGCGGAGAAGAGTGATGTATACAGTTTCGGGGTCTTCTTACTAGAGTTGATCAGTGGCTGTGAAGCACATAACAAAAACATGTTACACCCAGATGAAAATATAGTATTTCAGGCAAAAAATAGTGTTGATTTGGACAAATTTGTTGACATAACACTGGGATACCAAGAAAAGCATGGTGCTAGACAAATATTGATGTTGGCATTGCTATGTGTGGATGTTACTTTTAGAAGACCATCTATGGCGCAAATTGTGCTAGAGCTGGAGCGGATTCAAAGAGAAATTGCTCCCATGTATTCTCAATTCAACGATGAGATTGGTGCCGTGACTCTTGGGAGTGAGCTCTTTCAATAA	1422	0.4044	MFTMRLLWGLRLPLLILIQLLFPNRSTYKLYAEALITFKGSLGGPQQLGCSIVKYPCQMQWPCLDCYKLKDPGGVTAKIDGNNDIPTLTPLPEPQDRKPGGRKSSAIIGSAIAALVVLVIVVTVYICLMRVKKSMRQTSEVASSMPSPTVEMGRVNTQHVTAFSPQNTRQLTILELEQATRNFSHNNIIGEGGFGVVYKGLLQDGSIVAIKRRLFALTQDFVLEVKQIAHIHHIHLAKLIGYYEDSHQQLLVYEYLPNSNVGSHLYDSEGLPVGRLNLWRRLSIALGASKGVEHLHSLVPPLVHTNFRTSNVLLDENYTAKVSDYGFCKLQAQVDQAGSSSNVDCFLDPELNFPQNYAEKSDVYSFGVFLLELISGCEAHNKNMLHPDENIVFQAKNSVDLDKFVDITLGYQEKHGARQILMLALLCVDVTFRRPSMAQIVLELERIQREIAPMYSQFNDEIGAVTLGSELFQ	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco10g01524	473	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	114	447	IPR047117	-
	Phco10g01524	473	ProSitePatterns	Protein kinases ATP-binding region signature.	189	211	IPR017441	GO:0005524
	Phco10g01524	473	Gene3D	Phosphorylase Kinase; domain 1	145	255	-	-
	Phco10g01524	473	SUPERFAMILY	Protein kinase-like (PK-like)	162	452	IPR011009	-
	Phco10g01524	473	ProSiteProfiles	Protein kinase domain profile.	183	473	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phco10g01524	473	Gene3D	Transferase(Phosphotransferase) domain 1	257	465	-	-
	Phco10g01524	473	FunFam	receptor-like serine/threonine-protein kinase NCRK	157	255	-	-
	Phco10g01524	473	MobiDBLite	consensus disorder prediction	80	102	-	-
	Phco10g01524	473	Pfam	Protein tyrosine and serine/threonine kinase	186	400	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco10g01524	Phco-Chr10	38035368	38038135	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXa	Phco10g01524		PK_Tyr_Ser-Thr	1.1e-30	CL0016