Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01501 ATGGATTCTTATGCTGATCCTCAACCTACTGTAACTGTCTTATGGTTGGAATTGATGAAGCCTCAATTCAACGTTGCTGTGGCTCTACTTATTAGCTTGCTCTGTATTCAGCATTCATTTTGTGATGAACCTTCTGATACTGGACCAAACAAGTGGAAATGTAGATGCTCTTCATTACAAGGGAACCATATATACTCTCCTGCTAATTGTTCCAAGTCATGTGATTGTCATTCAGATGCTGCAGAGAGTGCATCCATATGGACATGCTTATGTGATTCGAATGGGTTTCCTGAAGTGTCAGCAGATGGCCATAACCTTAACTGTTTTAATGCCTGCAATTGCACGTGGGGAACTGTCAGGATGCCTCTAGGTTCAGAGAAGCAAATTTCGAGCAAGATTGTAGTAGTTATTCTATCAGTATGTCTTACTTGCACAACTATTGCATTTCTTGCCTCGGTTGTATGTCAGGTCTGCCGAAGGGAGAGATGTCCTATTCAATCACCAATGATCTCATCAGATAAAGAAACAAGTTACAGTAGCACCACCAACTTAATTAGTCATAAAACTTCTTCGCCTGTTAGTCATATTACAGGATGCTTTCAGAAGTCCTCTTTGTTGTTTGGTAGCCAAAGACAAACCTTTTATGGAAATATTATTCAATTTTCATTTGCTGAACTAGAAAATGCCACCGAAAAATTTTCAACTTCCAATCTAACTGGACTAGGTGGAAGTAGTTATGTATACCGTGGTCGGCTGAAAGATGGTAGTAATGTGGCAGTCAAGAGACTAAAAGATCAAAGAGGGCCTGAGGCAGACTATGAGTTTCTAACAGAGATTGAACTATTGTCTAGACTTCATCATTGTCATCTGGTGCCATTAGTGGGATACTGCTCAGAACTAAAAGGAAAAAATGTTCAAAGGTTGCTAGTGTTTGAATACATGACTAATGGAAATTTAAGGGACCGCTTAGATGGAGTTTTTGGAAAAAAAATGGACTGGTCAACTCGAGTTAGAATTGCATTAGGAGCTGCAAGGGGCTTAGAGTATCTTCATGAAGCAGCTGCTCCAAGAATTCTGCACAGAGATGTCAAATCAACAAACATTCTTCTGGACAAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAGCTTGAGAGCTGATGACCACCCCAGTATTTCAGATTCTCCAGCAAGAATGCAGGGGACATTTGGCTATTTTGCACCTGAGTATGCAATTTTTGGGAGAGCCTCTCTTGAGTCTGATGTCTTCAGTTTTGGAGTGGTTCTTCTTGAGCTTATCAGTGGTCGGCAACCCATCCACAAATCTGCAGGCAAAGAACAAAGTCTCGTTATATGGGCAACTCCTCGCTTAAAGGATAGCAGGCGAGTAATAACCGAGTTGGCTGATCCACAGTTGAAAGGAAACTTCCCAGAAGAAGAGCTGCATATAATGGCATACTTAGCTAAGGAGTGCTTGCTGTTGGATCCTGACACTCGACCAACTATGACTGAAGTTGTTCATATTCTTTCCAGTATCGCCCCAGACAGATCTAGAAGGAGAAGAAACATTCCAGTGAGCCTTTTTCAGGAACCGGAGGACTTGGAGAATCAAAGACAAGCTCCATCAAGTATATTTCCAACTTGTAATTTATTGCCATTAGGTGTTGACCACAATATTAATGTTGGAAATGAAAATAAAGATGCACATACAGTTTCAAGTGAGCATATGGAGAGTTTGATCCTCTTTAGTCCAAAGGGTGAGAGTTGGCATGCATCAGAGGAGGAAATGGTAGATTTAACTGAGCCTCGTTTCGAATCATTTTTCATGACAAACCCCAATTTCCCTTGA 1857 0.4076 MDSYADPQPTVTVLWLELMKPQFNVAVALLISLLCIQHSFCDEPSDTGPNKWKCRCSSLQGNHIYSPANCSKSCDCHSDAAESASIWTCLCDSNGFPEVSADGHNLNCFNACNCTWGTVRMPLGSEKQISSKIVVVILSVCLTCTTIAFLASVVCQVCRRERCPIQSPMISSDKETSYSSTTNLISHKTSSPVSHITGCFQKSSLLFGSQRQTFYGNIIQFSFAELENATEKFSTSNLTGLGGSSYVYRGRLKDGSNVAVKRLKDQRGPEADYEFLTEIELLSRLHHCHLVPLVGYCSELKGKNVQRLLVFEYMTNGNLRDRLDGVFGKKMDWSTRVRIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGMAKSLRADDHPSISDSPARMQGTFGYFAPEYAIFGRASLESDVFSFGVVLLELISGRQPIHKSAGKEQSLVIWATPRLKDSRRVITELADPQLKGNFPEEELHIMAYLAKECLLLDPDTRPTMTEVVHILSSIAPDRSRRRRNIPVSLFQEPEDLENQRQAPSSIFPTCNLLPLGVDHNINVGNENKDAHTVSSEHMESLILFSPKGESWHASEEEMVDLTEPRFESFFMTNPNFP 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01501 618 CDD STKc_IRAK 240 515 - -
Phco10g01501 618 SUPERFAMILY Protein kinase-like (PK-like) 213 512 IPR011009 -
Phco10g01501 618 PANTHER OS01G0750732 PROTEIN 82 519 - -
Phco10g01501 618 FunFam receptor-like serine/threonine-protein kinase NCRK 314 524 - -
Phco10g01501 618 SMART serkin_6 233 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01501 618 ProSiteProfiles Protein kinase domain profile. 233 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01501 618 FunFam receptor-like serine/threonine-protein kinase NCRK 207 313 - -
Phco10g01501 618 Pfam Protein kinase domain 237 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01501 618 Gene3D Phosphorylase Kinase; domain 1 206 313 - -
Phco10g01501 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Phco10g01501 618 Gene3D Transferase(Phosphotransferase) domain 1 314 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01501 Phco-Chr10 37818866 37823279 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Phco10g01501 Pkinase 5.1e-43 CL0016