Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01491 ATGTCTGATTTGCACTTTACAGCCATAGCCGCAAAATTGGGTGTCGACCCATTGAATCGGCAACTCCAGAGAGAAGTATTCATTGTGAAGATACTTTCTTCTTCTTTTCTCCTTCTTCATTTGCTTATGTGCAAGACAAAGATGGCCACCAACGCGGCAAGTCCCACTCCCACCCCGCGAACACAACAAGGCCCCACCCAAAGCCCAAGACCATCCTCCCCAAGGCCCACTCTCAGGCCCACCACTTCTTTCTCCGACAAACCCTCCACTTCCTACGCCTCCACCGCCAGCGCTCCCTACACCGGCTCCACCGGCTACCGTCTCTCCTCCGACACCTCCACTGCCAGCCGCACCTCGCTCACCTCCCTCCGCGACACGCTCCCAGAAAACCCTCACATATACGATTTCTCGGAAATCTGCGCCGCCACCAACAATTTCCTCGCCAAGCGCCACTCCTCCTCCACCCCTTGCTGGCGCTGCACTCTCCGCGGAGCCGAAGTCATTGTCTTCCAGCGCAAGTTCAGCCGCAAACTCCAGACGAATCAGCTCCAGCAACTCCTCTCTGTCGTCTGCCGCAGCCACCACGTCAGCATCATCAAACTCCTCGGCGCCTCCGTCTCCGGCGACCACATCTACCTCGTCTACGACTTCGTCAACGGCGCCAGCCTCTCCGATTGTCTCCGCAACAAGAACAACGCGCGCTTCACTGTTCTCTCCACGTGGATGTCGCGAATGCAGGTCGCGACGGATCTCGCGCACGGACTCGATTACATTCACAACAAAACCGGTTTGAACATCAATTTCGTCCACAACCGTATCAAATCCAGCGGTATCATGGTCACCGAACCTTCTTTCAACGCCAGGCTTTGCCATTTCGGCACCGCGCAGCTCTGCGGCGAAATCGACCTCCAAAACGAGCAATTAGGCGAAATCTTTGAGATAGAGGAGACATTTCCGCCGTCCCCGGCGAGATCCAGGCAATTCGAGGGCGTGCGGGGGTACATGGCGCCGGAATTTCAAGCCTCCGGCGTTGCGACTCAGAAGTCTGATATATACGCTTTCGGAGTGGTCATGTTGGAGCTCCTGTCCGGGGAGGAGCCACTGAAATTTAAATTTGACGAGAAGACGCGCGAATTTTTAAGAACGTCGGTGATCGAGACGGCGAGGGGCGCCGTGGACGGCGACGATGGTAGCGTGCAGGGAAAACTGAGGAAGTGGGTGGACCGGCGATTGAAAGACTCCTTTCCCTTGGACGTAGCTGAGAAGCTGACACGTGTCGCACTGGAATGCGTGCACGTGGATCCAGATAAGCGACCAAACATGGGACTGGTGGCTGGAAAGATCTCGAAGTTTTATTTGAAGTCGAGGAAGTGGTCGGACAGTATTAAAATTCCTGATATTACTGTTTCGTTGGCTCCTCGTTGA 1425 0.5523 MSDLHFTAIAAKLGVDPLNRQLQREVFIVKILSSSFLLLHLLMCKTKMATNAASPTPTPRTQQGPTQSPRPSSPRPTLRPTTSFSDKPSTSYASTASAPYTGSTGYRLSSDTSTASRTSLTSLRDTLPENPHIYDFSEICAATNNFLAKRHSSSTPCWRCTLRGAEVIVFQRKFSRKLQTNQLQQLLSVVCRSHHVSIIKLLGASVSGDHIYLVYDFVNGASLSDCLRNKNNARFTVLSTWMSRMQVATDLAHGLDYIHNKTGLNINFVHNRIKSSGIMVTEPSFNARLCHFGTAQLCGEIDLQNEQLGEIFEIEETFPPSPARSRQFEGVRGYMAPEFQASGVATQKSDIYAFGVVMLELLSGEEPLKFKFDEKTREFLRTSVIETARGAVDGDDGSVQGKLRKWVDRRLKDSFPLDVAEKLTRVALECVHVDPDKRPNMGLVAGKISKFYLKSRKWSDSIKIPDITVSLAPR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01491 474 MobiDBLite consensus disorder prediction 77 98 - -
Phco10g01491 474 Gene3D Phosphorylase Kinase; domain 1 107 217 - -
Phco10g01491 474 MobiDBLite consensus disorder prediction 51 98 - -
Phco10g01491 474 Pfam Protein kinase domain 176 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01491 474 PANTHER OS09G0572100 PROTEIN 43 474 - -
Phco10g01491 474 SUPERFAMILY Protein kinase-like (PK-like) 130 442 IPR011009 -
Phco10g01491 474 Gene3D Transferase(Phosphotransferase) domain 1 219 464 - -
Phco10g01491 474 ProSiteProfiles Protein kinase domain profile. 106 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01491 474 MobiDBLite consensus disorder prediction 51 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01491 Phco-Chr10 37640394 37642841 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phco10g01491 Pkinase 4.5e-24 CL0016