Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01490 ATGATCAACATCATGAATTCAATGGGCTCAGTGAATAACCTGAGTGTAGTAGAGAGGGAATATGAATCTTTTTCAGCCAAGGAAGGTCCCTCAATGGTGAAAAACAAGAGGCCTCCTTCCAGAGGCAGCAAGAGGGACCGCCACATCAAGGTGAATGGGAGAGACCGCCGAGTTCGTCTATCAGCAATCAGTGCTGCTCGTATCTTCCAACTCACCCGTGAGCTAGGCAAGAAGACAGATGGTGAGACCATCGAATGGCTCTTACACAAGGCTGAGCCAGCCATTATGGCCGCCACTGGCACTGGCATTGTGCCTTCCATCACCACCTCGGTGGACACTGCCGCCACCTTCATGGCCGACACCACCACCACCACCACCTTTCTGCCACTAGACACAATTGCTGCTCAGGATGCCAACTTAGTCACCGTTGCTGCGGTTGCAAGGACAGAGCAGCCGATCCCCCCTTTCCATTTCGACTTTGAGTGGATGCAACACTCCGATTTAGGATTTCGTGACAATTAA 522 0.5172 MINIMNSMGSVNNLSVVEREYESFSAKEGPSMVKNKRPPSRGSKRDRHIKVNGRDRRVRLSAISAARIFQLTRELGKKTDGETIEWLLHKAEPAIMAATGTGIVPSITTSVDTAATFMADTTTTTTFLPLDTIAAQDANLVTVAAVARTEQPIPPFHFDFEWMQHSDLGFRDN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01490 173 ProSiteProfiles TCP domain profile. 44 98 IPR017887 -
Phco10g01490 173 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 124 IPR005333 GO:0003700
Phco10g01490 173 MobiDBLite consensus disorder prediction 25 47 - -
Phco10g01490 173 Pfam TCP family transcription factor 43 111 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01490 Phco-Chr10 37636622 37637143 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco10g01490 TCP 8.5e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01490 10 37636622 37637143 Phco9g00910 9 7162281 7164550 PCT