Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01455 ATGGCGGAGGACCGGACTGAGGTGAGTGATTACAGTTCGGAGGACGAAGGAACTGAAGATTACAGGCGCGGAGGGTACCATGCGGTTCGGATTGGTGACACTTTCAAGAATGGGTGCTATGTGGTGCAGAGCAAGCTTGGTTGGGGTCATTTTTCCACTGTGTGGCTCGCTTGGGACACTAACAAATCGCGATATGTTGCCTTAAAAATTCAAAAGAGTGCTCAGCATTACACTGAAGCAGCAATGGATGAGATAAAGATTCTCAAACAGATTGCTGATGGGGATCCAGATGACAAAAAATGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTCAGGACCTAATGGCCAGCATGTTTGCATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAGTATAGTGATTACCGAGGTGTTCCCATTCCTATGGTCAAGGAAATTTGTTTCCATATTTTGGTGGGTTTGGATTACTTGCACCGTGAGCTTTCTGTAATACACACTGATTTGAAGCCTGAGAATGTTCTGCTTCTGTCTCCCATAGATCCATCTAAGGATCCTAGAAAATCAGGTGTTCCACTTATCCTTCCAAACACGAAGGATAAGACTGTCACAAAAAATGGGACAACAATAGCCAGTAAGAGTGTGAATGGAGATCTGACCAAGAACCAGAAAAAGAAATTGCGAAAGAAGGCTAAAAAGGCAGCCCAGGGCTATGTTGGAAGGGAACATGCCGAGGAAGCTGAGGAGGATTCCAAAGCACCTGATGAGCAAGATGATTGTAGTAATGATGTGAAACCAAGTGTAGAATCTGGTGACAATAAACCTAATTGTCCTGTTAGTAAAGATGAATCAACAAAGACTTCTGAAAATAAGGATGTTCCTCAAGGAAGTCATGGTCAGAGAAGAGGTAGCCGTACTACAAGAAAGAAGTTGCTTGAATCTGTCAATCTTAAGTGCAAGCTGGTTGATTTTGGTAACGCTTGTTGGACCTATAAGCAATTCACAAATGATATTCAGACAAGGCAGTATAGGTGTCCTGAAGTTCTTCTTGGATCTAAATATTCGACTCCAGCAGACCTATGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCTCTGGCGATGTTCTTTTTGATCCTCATAGTGGTGACAACTATGATAGGGATGAGGATCATCTAGCGTTGATGATGGAGCTTCTTGGGATGATGCCTCGCAAGATTGCACTTGGTGGGCGCTATTCCCGAGATTTTTTCAATAGATATGGCGATTTGAGACACATCCGTCGATTGCGTTTCTGGCCTCTTAATAAGGTGATGATGGAGAAGTATGATTTCAGTGAAGAAGATGCAAGTAGCATGGCCGACTTCCTTCTTCCATTACTTGATTTTGTCCCTGAAAAGAGGCCAACTGCTGCAGTCTGCCTTCAGCATCCATGGTTCAGTGCTGGTCCCCGGACTCTTGAGCCCTCAGTGGCTAATGTGCATCATGCTGCAATTGATGGGGAAATATCTGAAAAGATGCAGAGGGAAAAAGCTGGGCAGGAGGCTGTGGAGGTTGGTATGGGGAATATGGCCATAGATGGAAATTCAAAGCAACTCTAA 1608 0.4384 MAEDRTEVSDYSSEDEGTEDYRRGGYHAVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTNKSRYVALKIQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPIPMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSPIDPSKDPRKSGVPLILPNTKDKTVTKNGTTIASKSVNGDLTKNQKKKLRKKAKKAAQGYVGREHAEEAEEDSKAPDEQDDCSNDVKPSVESGDNKPNCPVSKDESTKTSENKDVPQGSHGQRRGSRTTRKKLLESVNLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELASGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVMMEKYDFSEEDASSMADFLLPLLDFVPEKRPTAAVCLQHPWFSAGPRTLEPSVANVHHAAIDGEISEKMQREKAGQEAVEVGMGNMAIDGNSKQL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01455 535 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 11 502 - -
Phco10g01455 535 Gene3D Transferase(Phosphotransferase) domain 1 297 482 - -
Phco10g01455 535 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Phco10g01455 535 MobiDBLite consensus disorder prediction 180 310 - -
Phco10g01455 535 CDD STKc_SRPK 29 482 - -
Phco10g01455 535 MobiDBLite consensus disorder prediction 238 253 - -
Phco10g01455 535 SUPERFAMILY Protein kinase-like (PK-like) 35 491 IPR011009 -
Phco10g01455 535 ProSiteProfiles Protein kinase domain profile. 40 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01455 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Phco10g01455 535 Gene3D Phosphorylase Kinase; domain 1 26 125 - -
Phco10g01455 535 FunFam CMGC/SRPK protein kinase 26 125 - -
Phco10g01455 535 MobiDBLite consensus disorder prediction 202 221 - -
Phco10g01455 535 Gene3D Transferase(Phosphotransferase) domain 1 94 182 - -
Phco10g01455 535 FunFam Serine/threonine-protein kinase SRPK-like protein 312 482 - -
Phco10g01455 535 SMART serkin_6 40 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01455 535 MobiDBLite consensus disorder prediction 269 286 - -
Phco10g01455 535 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01455 535 Pfam Protein kinase domain 319 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01455 Phco-Chr10 37201011 37205852 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Phco10g01455 Pkinase 1e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01455 10 37201011 37205852 Phco10g01455 10 37201011 37205852 ECH
Phco10g01455 10 37201011 37205852 Phco9g00973 9 8000947 8004684 PCT