Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01407 ATGAATTTCCAACAATCAGAGCAAGAGGTGCCATTGCAAGACACAGAAGCCGCATTTTCTCAACTGAACCAACAAAATTCAGTACTTTCACTCACCCTTGATGAGGTCAGCGGCAAGAACGGAAAGAGCTTAGGGTCCATGAGCATGGATGAATTCATAGCCAGCATTTGGAACACTGATGACGTCCCACCAATACCCGTCTATGAGGAAGCTTCAAAGAACAAAAGCGTTGCACCAGAACCCACCATTCCCCAGCCAGGCTCATTCTCTGTCCCTCCCCCAATTTGCAAGAAAACTGTTGATGAAGTTTGGTCTCAGATCCAAAAAAGCCAACCACAGCAGCACAATGAAGCTAATGATAGCCTTGACAAGAATGAAACACTCCAAAAGCAACCCACATTTGGAGAAATGACTCTGGAGGAATTCCTAGTAAAAGCTGGGGTTGTACGAGAATCATCACTTTTCACTACTTTATTACCTCAGAATAATTTTGGTAACATTCCAAGCAATGTACCATTTAATACAAGTTATATATTAATAGGAACTACTGGATCTAATGTGCCTAGCACTAGATTTGAACCACATCCAATGCTGCCACAGAATAACACCTTAGTTGTAAGGAATTTCACTACTGCAAGTGCTACTCATGGTCAAAACTTGGGAGAATCAAGTGGGAAGGGTAAGAAAAGGATAATTAATGGTCCTCCTGATGTGGTAATAGAGAGAAGGCAGCGCAGAATGCTGAAGAATCGTGAATCAGCAGCACGATCTCGAGCAAGAAGACAGGCATATACTGTGGAGCTTGAAGCAGAGCTGAATAATCTGAAAGATGAAAATGAAAAGCTCAAAAAAGTTCTGGCTGCTGATGAACTCAAGAGAAAAGAAGCTATATCTCAGAGAAAGCCCACAACAATGGCTCAAAAGAGGACTGAGAAATTGAAGAAATTGAAGAGGCCTCAAAGCGCATCCTGGTGA 975 0.4236 MNFQQSEQEVPLQDTEAAFSQLNQQNSVLSLTLDEVSGKNGKSLGSMSMDEFIASIWNTDDVPPIPVYEEASKNKSVAPEPTIPQPGSFSVPPPICKKTVDEVWSQIQKSQPQQHNEANDSLDKNETLQKQPTFGEMTLEEFLVKAGVVRESSLFTTLLPQNNFGNIPSNVPFNTSYILIGTTGSNVPSTRFEPHPMLPQNNTLVVRNFTTASATHGQNLGESSGKGKKRIINGPPDVVIERRQRRMLKNRESAARSRARRQAYTVELEAELNNLKDENEKLKKVLAADELKRKEAISQRKPTTMAQKRTEKLKKLKRPQSASW 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01407 324 MobiDBLite consensus disorder prediction 296 310 - -
Phco10g01407 324 SUPERFAMILY Leucine zipper domain 242 286 IPR046347 GO:0003700|GO:0006355
Phco10g01407 324 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 245 260 IPR004827 GO:0003700|GO:0006355
Phco10g01407 324 Gene3D - 240 296 - -
Phco10g01407 324 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 307 IPR043452 GO:0003700|GO:0045893
Phco10g01407 324 MobiDBLite consensus disorder prediction 72 94 - -
Phco10g01407 324 Coils Coil 261 292 - -
Phco10g01407 324 SMART brlzneu 238 318 IPR004827 GO:0003700|GO:0006355
Phco10g01407 324 MobiDBLite consensus disorder prediction 215 234 - -
Phco10g01407 324 MobiDBLite consensus disorder prediction 296 324 - -
Phco10g01407 324 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 240 284 IPR004827 GO:0003700|GO:0006355
Phco10g01407 324 Pfam bZIP transcription factor 242 286 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01407 Phco-Chr10 36688480 36690028 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco10g01407 bZIP_1 2.7e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01407 10 36688480 36690028 Phco10g01407 10 36688480 36690028 ECH