Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01389 ATGGCAGATCTCCCACCTGGTTTTCGATTCTACCCGACAGAGGAAGAGCTTGTTGCCTTCTATCTGCACAACCAGCTCCAGGGACAAATACACGACACAAGCAAGGTTATTCCAGTCATTGACATCAATGGCATAGAGCCTTGGAACCTTCCAACACTTGCAGGGGAGCGTTGTCGTGGAGACACGGAGCAATGGTTCTTCTTTTCGCCGAGACAAGAGAGAGAGACGAGAGGAGGTAGACCCAACAGAACCACCGCAAGTGGGTACTGGAAAGCCACTGGTTCTCCTTGCCTCGTTTACTCTTCTGACAACAAAGTCATTGGGATGAAAAAAACCATGGTGTTTTACAAAGGGAAGGCTCCAACTGGAAGGAAAACCAAATGGAAGATGCATGAGTACAAAGCCATTCAACACTCTCACCATTCCAACACAACCTCTCCCAAGTTGAGGCACGAATTCAGTTTGTGCCGTGTTTATGTTATATCGGGAAGCTTTAGATCGTTTGATCGACGACCTCTAGAGATGGCAAGAGGTGAGTTAGGAGTTGATGAGGATAGAGATGCTGCTTCAACGAGTGGTCAACAGAGAGCACCGGTGGTGGATGGTTCAAGTTCTTCTGATACTTCCCACTCTGGTGATGCTCATATTCATGAAGCTGGAGCAGGGTCAAGTGGCATACATTTGAATACAAGCAATAGGGTTGAGGAACCATTTTGGGAATGGGAAGAGTTAATTGGAGATGAGCCCTATCTGAAGCGTGCTTAA 765 0.4719 MADLPPGFRFYPTEEELVAFYLHNQLQGQIHDTSKVIPVIDINGIEPWNLPTLAGERCRGDTEQWFFFSPRQERETRGGRPNRTTASGYWKATGSPCLVYSSDNKVIGMKKTMVFYKGKAPTGRKTKWKMHEYKAIQHSHHSNTTSPKLRHEFSLCRVYVISGSFRSFDRRPLEMARGELGVDEDRDAASTSGQQRAPVVDGSSSSDTSHSGDAHIHEAGAGSSGIHLNTSNRVEEPFWEWEELIGDEPYLKRA 254
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01389 254 Gene3D NAC domain 13 164 IPR036093 GO:0003677|GO:0006355
Phco10g01389 254 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
Phco10g01389 254 MobiDBLite consensus disorder prediction 180 229 - -
Phco10g01389 254 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Phco10g01389 254 MobiDBLite consensus disorder prediction 191 210 - -
Phco10g01389 254 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 188 - -
Phco10g01389 254 ProSiteProfiles NAC domain profile. 4 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco10g01389 Phco-Chr10 36561458 36562442 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco10g01389 NAM 2.7e-33 No_clan