Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01376 ATGTCTTCCAAGAAGAGAAAAAGGTTTATGAGAGGCCTATTCAACACAAATGGATGTTGTGGATGTAGCAACCCTAAATCATATGATGTACTCCAACCCTCCCCAAAACTCAACATCTCAATCAACCAAAACACAAACCCTACCATTTCCGGCGACAACCACTATAAAGACAACCAACCCTTCTCCCAACTCCACACAAACCATCAAAACCCTAACAATAACATGCCAAAACCAAATTCAAAACTCATTCACAGTGTGGCCGTTGAGAAGGACTCAAACGACCCGCACAAGGACTTTCGAGACTCCATACTCCAAATGATCTTCCAGAGACAAATCTACACCGAACCCGATCTTCAAGACCTTCTCGAGTGCTTCCTCCGGTTGAACGCCGCCTGTCATCACCAAGTTATCGTTCGAGCATTCATGGAGATTTGTCAAGAAACCTTCCCCAAGAAGAATATCAACGCCGACGGCAACGGTGCTTCTTTCGATAACAAAATTTGA 504 0.4425 MSSKKRKRFMRGLFNTNGCCGCSNPKSYDVLQPSPKLNISINQNTNPTISGDNHYKDNQPFSQLHTNHQNPNNNMPKPNSKLIHSVAVEKDSNDPHKDFRDSILQMIFQRQIYTEPDLQDLLECFLRLNAACHHQVIVRAFMEICQETFPKKNINADGNGASFDNKI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01376 167 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 59 148 IPR038933 GO:0045892
Phco10g01376 167 Pfam Transcriptional repressor, ovate 92 147 IPR006458 -
Phco10g01376 167 ProSiteProfiles OVATE domain profile. 88 147 IPR006458 -
Phco10g01376 167 NCBIfam uncharacterized plant-specific domain TIGR01568 86 146 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01376 Phco-Chr10 36361550 36362053 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco10g01376 Ovate 1.1e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01376 10 36361550 36362053 Phco10g01376 10 36361550 36362053 ECH
Phco10g01376 10 36361550 36362053 Phco9g01077 9 9577131 9577700 PCT