Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01285 ATGATAATGTATCCCGGCGACGGCTCCTCCTTGGACCCCATGTTTTCCGGCACCAGTCTACAGTCACTCCTCTCTCTCAACCCTTCCATCTTGGAGGATGGCTTCCCCACCTTGGCTTCCCTAACCGACGACCCTACCTTAATACCGCAACCTTCAGAAGTTCCAAAGCTTCTCGTTCCCAAAACCGAACCCTCACAACCCTTCAAATTCTTCCCCCAATATCATCCCACTCCCTTCCTCCGCCTTCCCCAGCTCCGCTCCCCGGACCAGCCTCAGCCAAAACGCCAACGGATGGAGTCTCCGCTGATCCCGCAGAGTAACCTGGCTCGCCAACGCAGACAGAAGCTGAGCGAGAAAACGCGGTACCTGCAGAAACTGATGCCGTGGGACAAGAAAATGGATCAAGGGACGCTTCTGGAGGAAGCCTACAAATACGTGAGGTTCCTTCAGGCGCAGTTCCGCGTGCTACAGTCCATGCCCTCCCACTCCTCCTCTTCCTCCTCCTCCTCCTCCCGACAAAATACCGCCGCCGTATTCGTAGATCTGGAGAAGCTGAACCGATCACAACTCCTCCAGGTGCTGGTTAACTCCCCCGTCGCTCAAACAATGCTTTATTCTCAGGGCTTTTGTGTCTTCTCTCTCGAACAGTTATCACTGCTCAGACAATTATCCGACAGAAAACACAAGCACCATGATTCTGCTTTCTCCAAATCTGTTTTTAACTAA 726 0.5303 MIMYPGDGSSLDPMFSGTSLQSLLSLNPSILEDGFPTLASLTDDPTLIPQPSEVPKLLVPKTEPSQPFKFFPQYHPTPFLRLPQLRSPDQPQPKRQRMESPLIPQSNLARQRRQKLSEKTRYLQKLMPWDKKMDQGTLLEEAYKYVRFLQAQFRVLQSMPSHSSSSSSSSSRQNTAAVFVDLEKLNRSQLLQVLVNSPVAQTMLYSQGFCVFSLEQLSLLRQLSDRKHKHHDSAFSKSVFN 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01285 241 MobiDBLite consensus disorder prediction 82 114 - -
Phco10g01285 241 SMART finulus 106 155 IPR011598 GO:0046983
Phco10g01285 241 Gene3D - 104 173 IPR036638 GO:0046983
Phco10g01285 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 110 162 IPR036638 GO:0046983
Phco10g01285 241 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 91 219 IPR045843 GO:0003700|GO:0006355
Phco10g01285 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 100 149 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01285 Phco-Chr10 35194898 35195623 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco10g01285 None None None