Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01284 ATGGGCGATGGAGGCGTCCCGTGCATGCCTTTGCAGTATATTATGGAGAGGTTGCCGAGTTCCGAGAAGACTGTTGTGTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGTTCAAGTTTGCTGGCAATGAGAGGAGGAAGATGAAGGCGAGAAAGAGTGAATTGGGGTTGGACAGAGTGAGCAAGAGGAGCAGCAATGACGTTGAGAATGGTGGCGAAGTGGAGAAGCAGCAAGAAAAGGTGCAGAAGGAGGAAGTTGAGGAGGGTGAATTGGGCACTTTGAAGTGGCCTAGGACTGACCTGGAAAATGGGGAGTTCGTGCCGGAGATGCCGCCGCCACCCCCACCGAGGAGGGGCGAGATTGAGAACGGGGAGATTGTGAGTGAGAAGTGGAAAGGACGGGAGCTGGAGAAGGGGGAGATTGCTTCTGGGAAATGGAGAAAAGAGGATATTGAAAGAGGGGAGATAGTTCCTGAGAAGGGTGGTAGGAAAGGGGAAGCTGAGAGAGGTGAATATGGGTCGTGGAGAGGAGTAAATGATGAAATTGAGAAGGGAGAATTCATTCCGGATAGATGGTACAAGGGAGATTATGATAGCAGTAGAATCCGCAGATACCATTCAGGTAGGGACAAAGGGTGGAAAGTTGAACGTGAACGTGAACGTGAAAGTACACCTTCTGGGAGATATACAGGGGATGATTTTTTTAGGAAGAAGGAATTGAATATTCGTGGGAGTCAGCATGCTAAAAGTTCTCCCAGGTGGGAGGGTGGACAACAGCGGAATGTAAGGATCAGTTCAAAGATTGTGGATGACGAGAAGAACGTTCACAGCAATGGTAAGGACCATGCACGAGATTACACTTCGGGAAGTCGCTTGAAGAGGCTTGGCAATGATACTGACAGCTATGAGCGGAAGCATTCTGCAGATTATGCCGGTTTAAAAAGCCGAAGACTTTCTGATGATAGCGGTCGCCAAGTTTATCCGGAAAACTATTCTCGTCGTTCTGTGGAACGGTCTTACCGAACTAATAATGCTACAAAATTATCGGCAGATAAATATTCAAGTAGGAATCATGAATCTTCTTTGTCTACTAGACAGGTTTATGACAGGCATGGGCGCAGCCCTGGTCATTCTGAGCGATCCCCACGAGACAGAGGCAGGTATTATGATCATAGAGATAGAACTCCAGTACGCCGGTCTCCTTGTGGTCGTGACAGATCTCCCTATAACAGGGAGAAATCTCCACCACATGGTCGGGAGAGGTCACCATATCTGTATAACCGGGAGAAATCCCCCCATGGTCGGGAGAGGTCGCCATACACAAGGAACTGGGACAGAAGTCGTCAGCATGATCATAAATTGAGAAGTCCAACACGAGCTGAGCAATCACCGCCAGATCGAAGTCGGCAACATGATCCTAGGGATAGTACCCCAAATTTGTCAGAAGCATCTCCCCTAGATCAGGCTAGGAAAGACAGTCGTCGTGATTCAAGTTGTAAAACCTTACCAAGTGAAAAACATGATTCCCAGAATTGTTGTAAGGATATTGAGGATAAGCAGACTCAGAGGGATTCAAACTGCTCAAGTACCGAGTCTCAGAATGAAAAAAGTGTGCAAGAAGCCATTAAGTCTGTTGAGAAAGATACCTGCAGTCAACCTTTAAAGGATCACCAGAGTTGCAGCCCAACTGTTACCCACAAAGAATCTCCTCACTCCGAGCCACCTCCTGAGGAGATGCCTTCTATGGAGGAAGATATGGACATTTGTGATACCCCTCCACATGTCCCTGTGGTGACAGATTTGTCATCAGGGAAATGGTATTACCTGGACTATGGTGGTGTAGAAAATGGGCCTGCTAAATTGTGCGACATCAAGGTCCTTGTGGATGAAGGTGTACTAATGTCAGATCACTTTATCAAGCACCTAGATAGTGATAGGTGGCTAACAGTTGAAAATGCCGCGTCACCTTTGGCACCTCAGAACTTTCCTTCGATTGTGTCTGATACCATAACTCAACTGGTAAATCCTCCAGAAGCTCCTGGTAATATCTTGTCAGATACACCTGATATTCTTCAATCTGCTCCTGAGTATCACCAGGAAATGCTAACCCCCTCGCCGCCTCCATTAGTGTGCCCTAGTGACAGTTTGCGTTCATCTGAACTTTTGGAGGACTTCCACATTGATGAAAGAGTTCAAAATCTATTAGAGGGTTATGATGTCACTCCTGAGATGGAACTTGAGGCAATAAAAGAAGTGTTGCTAATGAATTTTGAAAATGCAAAAGGGGAGGGATCGAGAGACTATGAAGGTTTTCCTTGGAGTGTTTCCTGCCTTGGGGAAGATTGTGATTCTAGTACTGATTTAGCATCTAGAGATTCTGAGTCACAGTTAAGTATGTCATCTGATAAGGATAATGGACTTGGCTTTGGTATTTCTAGTGACTGGTTTTCCACCCGTTGGTCATGTAAAGGTGGTGACTGGAAGAGGAATGATGATGCCCTGGATAGATATTCTAGAAAGAAACTTGTCCTAAATAATGGTTTTTCATTGTGTCAAATGCCAAAGTCTGGATGTGAAGATCCTCGTTGGCCTCAAAAAGATGACTTGTATTTTCCTTCTCAAAGCAAGAGGCTTGATCTTCCACTGTGGGCTTTCAGTGCTGATGAGCGGGATGAATGCAGTGTTGCAGGCAGATCAGTTCAAAGTAAGCCTGTTTCTGTGAGAGGAGTGAAAGGCAATGTTCTTTCAGTGGTCAGGATAAATGCATGTGTGGTAAAGGACCAGGGGTCATTGGTCTCTGAGTCACGCCACAAGACACGGGGCAAGGAAAGACATCATTCTAGGTCAAGTCGGCCCTTCTCAACCAGTGATAGCAAGAGATCATCAACTGAACATGATTCTCAGTTAAAAGCTTTTAGTGATCAAGGTTCTTACAAGATCATGGAATTCCTTAATACTCCTAAAGATCATCTCTGTACTATCCTCGAGTTGCAATTACATTTGGGTGACTGGTATTATTTTGATGGTTCTGGGCGTGAAAGGGGCCCCTCATCATTTTCAGAGCTACAGTATTTAGTAGATCAAGGTATCATAAAAAGGCATAGCAGTGTGTTCAGGAAAAGTGATAAACTCTGGGTTCCTATTACCTCTGCAACAGAAACATCTGATGGTAGTCTCACGATCCAACAAGAAAGCAGTTCAATATCTGGGGCATGCTTTGGTTTTTCATCAAAGCAAACTCAAGCATGCGGTGAGCCTTACACAAATTCAAGTTTGTTTAACAGCTTACATCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACATGAGCTGGTAATGAAATCATACAAAAGCCGAGAGTTTGCTGCTGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAATTGAAAAACAACTATATTGGAAATCAGAAGGTGATGCACATGCTGCGAAGAGAGCCCGGATGTTGGTTGATGACAGTGACGAGGACAGTGATTTGGAAGATGGTGATTTTACTATTGAGAAGGATGAATCCAGTTTTGAGGATCTATGCGGTGATGCTACTTTACCTGAAGATGAAATTGGTGTTACTGATTCTCAAATGGGAAGCTGGAACAATTTGGATGGTCGTGTGCTAGCTCGGATTTTCCATTTTTTGAAATCTGATTTGAAGTCCCTTGTTTTTGCTTCAATGACTTGCAAGCGCTGGAGAGCTTCTGTAAGGTTTTATAAAGAAGTGTCAATGCAGGTCAACTTGTCATCCTTGGGTCATTCCTGTACCGATACTATGTTGTGGAACATTTTGAATGATTACGAGAAAGAAAGGATCAATTCTATAATTCTAAGGGGTTGTGTTAATATTACAGCTGAGATGCTTGAGAAAGTTCTTCTTTCATTTCCTGGTTTATTTACTGTTGACATTAGAGGGTGCAACCAGTTTGGAGAGCTAAGTCTTAAGTTTGCAAATGTGAAATGGATCAAGAGCCGAAGTTCACACTTGACTAAAATTTCCGAGGATCCTCATAAAATTAGAAGCCTTAAAAATATTGCAGAGCTAACCTCATCTGTATCCAAATCCAGCAGTGTCGGTATAGATGATTTTGGGCAATTGAAGGATTATTTTGATAGTGTGGATAAGAGAGATACCAAGCAATTATTCCGTCAAAACTTGTACAAGCGATCAAAACTATATGATGCTAGAAAGTCCTCCTCCATTCTATCGAGGGATGCTCGCACAAGACGTTGGGCAATCAAGAAATCTGAAAGTGGTTATAAGAGGATGGAGGAATTCCTTGCCTCAAGACTCAGGGAAATTATGAAGACAAACTCTTGCGATTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAATGGTTACTACAGTAGCCGTGGGTTGAATTCTGTGAAAGAGGACATAAGTAGAATGTGCCGTGATGCCATAAAAGTGAAGAATCGGGGTGATGCTAGTTACATGAATCATATTATCACACTGTTTATTCAGCTTGCAACACGGCTGGAAGAGAGTTCTAAATCTGTGCATGACAGAAATGCATTACTGAAATCATGGGACAATGACTTGCCTGCAGTCTCCTGCTCTACTTTGTCAAAGTATAAGAAGAATAGGTTGGTGAATGAAAGGAAGTATAGGAGTAATGGGACACATGGTTTGGATAATGTGGAATATACCTCTGATCGAGAAATTAAGAGGCGATTATCAAAGTTGAACAAGAAATCTATGGACTCAGAGAGTGAAACATCTGATGATGATCTTGATATGTCCTATGAAGATGGAAAGAGTGATAGTGATACTACAACCTCTGACACTGAAAGTGATCGAGAAGTACATTCAGAAAGTCTAATCAGGGAGTCAAGAGGGGAAGGATACTTGACATTTGAGGAAGAGTTGGATTTTATAACTGATGATCGAGAGTGGGGTGCACGCATGACAAAAGCAAGTTTGGTTCCTCCAGTTACCAGGAAATATAAAGTCATTGATCAATATTGCATTGTAGCTGATGAGGAGGATGTGCAAAGGAAGATGAGGGTTTCATTACCAGACGACTATGCTGAGAAGCTGAGTGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTGAAAGATTACAAACCTAGAAAGCAGCTAGGATATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTTTACACACAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGACTCTGCTGGAGAAGCATTTGTTTATAGAAGATACACTCCTTCGAACATTGAATAAGCAAGGTAGAAATTTTACTGGAACTGGAAGCACTCCAATGAGCTACCCGTTGCGGCCTGTTGTTGAAGATATTAAAAGACATGCTGAGGAGGATTGTGATGCCAGAATGGTTAAAATGTGTCAAGGTATTCTAAAGGCCATGGACAGTCGTCCTGATGACAAATATGTAGCTTATAGGAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGATTTGCGGAAGATGATTTTGTAGTGGAGTTTTTGGGAGAGGTTTATCCTGTGTGGAAGTGGCTTGAGAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTACAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCCATGCATATGGCTAATTATGCCAGTCGAATATGTCATTCGTGCCGACCTAACTGTGAAGCCAAGGTTACTGCTGTTGATGGTCAGTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTCGACTACAATTCTGTAACAGAGAGCAAGGAGGAGTATGAAGCATCGGTTTGTTTGTGTGGAAGCCAAGTATGCCGTGGGAGCTATCTAAATTTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGACTCTCATGGAATTCTGGATCGGCATTATTTGATGCTAGAAGCTTGTGAATTAAATTCTGTATCTGAAGAGGACTATAATGACCTTGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTTGTTGCTTATGCGGCTCGCCTTGTGAGATTTATCAATTTTGAAAGAACAAAACTTCCTGAAGAAATTCTAAAGCATAATCTGGAAGAGAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAAAGGAGTGATGCCGAAGTTCAGGCTGAGGGTGTTTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTTATGAGATGTATTTTTGGTGATCCACGGAAAGCTCCACCTCCTCTTGAGAAGCTCAGTCCTGAGGCAACTGTTTCCTTCCTCTGGAAAGGCGAGGGTTCATTTGTTGAGGAGCTTCTTAAGTGCATCGCCCCTCATATTGAAGAAGACATCTTGAAAGATCTGAAGTTTAAAATTCATTCTCGCGATCCTTCAAATTCAGTAGATATTCAAAAAGAGCTGCGAAAATCCTTGTTATGGTTGAGGGATGAGGTCCGAAATCTTCCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGGATACAGAATTATCAAACGATTACATCACCACCTGTTTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTAACAAGTCGGGAGCAGAATTTCAGGAGTACCGAAAGGTATATGGTGAAAATTATTGTTTAGGACAGCTGATATTTTGGCACAACCAGAGTAATGCAGATCCAGACCGGAGCCTGGCTAGAGCTAGCAGGGGTTGCTTGTCTTTACCAGACGCCAGCTCCTTTTATGCCAAGGCGCAGAAGCCCTCTCGACATTGTGTTTATGGTCCAAGGACCGTCAGATCTATGCTTGCTAGAATGGAGAAGCAGCCGCAGAGGTCTTGGCCCAAAGACCGGATATGGTCATTCAAAAATTTTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAGTAAATAACTCTGCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAAGCCATGTGGGACCGTTAA 7182 0.4301 MGDGGVPCMPLQYIMERLPSSEKTVVCGGKSGNGFNSKLFKFAGNERRKMKARKSELGLDRVSKRSSNDVENGGEVEKQQEKVQKEEVEEGELGTLKWPRTDLENGEFVPEMPPPPPPRRGEIENGEIVSEKWKGRELEKGEIASGKWRKEDIERGEIVPEKGGRKGEAERGEYGSWRGVNDEIEKGEFIPDRWYKGDYDSSRIRRYHSGRDKGWKVERERERESTPSGRYTGDDFFRKKELNIRGSQHAKSSPRWEGGQQRNVRISSKIVDDEKNVHSNGKDHARDYTSGSRLKRLGNDTDSYERKHSADYAGLKSRRLSDDSGRQVYPENYSRRSVERSYRTNNATKLSADKYSSRNHESSLSTRQVYDRHGRSPGHSERSPRDRGRYYDHRDRTPVRRSPCGRDRSPYNREKSPPHGRERSPYLYNREKSPHGRERSPYTRNWDRSRQHDHKLRSPTRAEQSPPDRSRQHDPRDSTPNLSEASPLDQARKDSRRDSSCKTLPSEKHDSQNCCKDIEDKQTQRDSNCSSTESQNEKSVQEAIKSVEKDTCSQPLKDHQSCSPTVTHKESPHSEPPPEEMPSMEEDMDICDTPPHVPVVTDLSSGKWYYLDYGGVENGPAKLCDIKVLVDEGVLMSDHFIKHLDSDRWLTVENAASPLAPQNFPSIVSDTITQLVNPPEAPGNILSDTPDILQSAPEYHQEMLTPSPPPLVCPSDSLRSSELLEDFHIDERVQNLLEGYDVTPEMELEAIKEVLLMNFENAKGEGSRDYEGFPWSVSCLGEDCDSSTDLASRDSESQLSMSSDKDNGLGFGISSDWFSTRWSCKGGDWKRNDDALDRYSRKKLVLNNGFSLCQMPKSGCEDPRWPQKDDLYFPSQSKRLDLPLWAFSADERDECSVAGRSVQSKPVSVRGVKGNVLSVVRINACVVKDQGSLVSESRHKTRGKERHHSRSSRPFSTSDSKRSSTEHDSQLKAFSDQGSYKIMEFLNTPKDHLCTILELQLHLGDWYYFDGSGRERGPSSFSELQYLVDQGIIKRHSSVFRKSDKLWVPITSATETSDGSLTIQQESSSISGACFGFSSKQTQACGEPYTNSSLFNSLHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQLYWKSEGDAHAAKRARMLVDDSDEDSDLEDGDFTIEKDESSFEDLCGDATLPEDEIGVTDSQMGSWNNLDGRVLARIFHFLKSDLKSLVFASMTCKRWRASVRFYKEVSMQVNLSSLGHSCTDTMLWNILNDYEKERINSIILRGCVNITAEMLEKVLLSFPGLFTVDIRGCNQFGELSLKFANVKWIKSRSSHLTKISEDPHKIRSLKNIAELTSSVSKSSSVGIDDFGQLKDYFDSVDKRDTKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWAIKKSESGYKRMEEFLASRLREIMKTNSCDFFVPKVAEIEAKMKNGYYSSRGLNSVKEDISRMCRDAIKVKNRGDASYMNHIITLFIQLATRLEESSKSVHDRNALLKSWDNDLPAVSCSTLSKYKKNRLVNERKYRSNGTHGLDNVEYTSDREIKRRLSKLNKKSMDSESETSDDDLDMSYEDGKSDSDTTTSDTESDREVHSESLIRESRGEGYLTFEEELDFITDDREWGARMTKASLVPPVTRKYKVIDQYCIVADEEDVQRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDYKPRKQLGYEVIEQEVYGIDPFTHNLLLDSMPEELDWTLLEKHLFIEDTLLRTLNKQGRNFTGTGSTPMSYPLRPVVEDIKRHAEEDCDARMVKMCQGILKAMDSRPDDKYVAYRKGLGVVCNKEEGFAEDDFVVEFLGEVYPVWKWLEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEATVSFLWKGEGSFVEELLKCIAPHIEEDILKDLKFKIHSRDPSNSVDIQKELRKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIQNYQTITSPPVYISPLDLGPKYTNKSGAEFQEYRKVYGENYCLGQLIFWHNQSNADPDRSLARASRGCLSLPDASSFYAKAQKPSRHCVYGPRTVRSMLARMEKQPQRSWPKDRIWSFKNFPKFFGSPMLDAVVNNSALDREMVHWLKHRPAIFQAMWDR 2393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01284 2393 SMART set_7 1829 1969 IPR001214 GO:0005515
Phco10g01284 2393 MobiDBLite consensus disorder prediction 1608 1633 - -
Phco10g01284 2393 SUPERFAMILY F-box domain 1207 1249 IPR036047 GO:0005515
Phco10g01284 2393 CDD SET_SETD2-like 1837 1985 - -
Phco10g01284 2393 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1974 2393 IPR045606 -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 50 131 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 365 478 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 206 585 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 489 526 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 339 364 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 1584 1633 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 267 325 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 556 570 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 950 969 - -
Phco10g01284 2393 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 429 2393 - -
Phco10g01284 2393 Gene3D SET domain 1807 1994 IPR046341 -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 527 541 - -
Phco10g01284 2393 Pfam SET domain 1906 1963 IPR001214 GO:0005515
Phco10g01284 2393 CDD F-box_SF 1220 1247 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 935 971 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 50 97 - -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 206 246 - -
Phco10g01284 2393 SUPERFAMILY SET domain 1838 1986 IPR046341 -
Phco10g01284 2393 MobiDBLite consensus disorder prediction 247 266 - -
Phco10g01284 2393 ProSiteProfiles SET domain profile. 1820 1963 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01284 Phco-Chr10 35177014 35191394 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco10g01284 SET 1.4e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01284 10 35177014 35191394 Phco10g01284 10 35177014 35191394 ECH