Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01226 ATGGTAAGGCGATTGCTTTCAAGGGAAAGTAGTGAGCAGAAGATTAACATTGAGCTTGGAAGAACGGGTGAGGAGAGATCTGGTTCACAGTACAAGAGAGTGAAGATCCATGGCGAAGTTCTATTGGGATTTCTGTTGATCTGCATAGTCCAGTTTTCACATGCAGACACTGATCCCTCTGATGTTGCAGCAATAAATAACTTATATACTGCATTGGGCAACCCTGTTCTTCCTGGGTGGGTTCCTAGTGGAGGTGACCCGTGCGGACAAGCGTGGCAAGGTGTTCGATGTAATGGTTCAGTCATTCAAGAAATAACTCTGAATGGTGCAAACTTGGGAGGAGAACTGGGTGAAGGCTTAGGAAGTTTTGTTTCTATCAGAGCTATAGTTCTAAACAACAATCACATTGGGGGAAGTATTCCATCTAGTTTGCCAGTCACTTTGCAACACTTCTTTCTTTCAGATAACCAGTTCACTGGTGGTATTCCCGCCTCTTTATCTACGTTGACTGAATTGAGTGACATGTCTCTTAACGACAATCTTTTAACAGGACAAATACCTGATGCATTTCAGTCTCTTACTCAATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCATCTATGGAGAACTTGTCAGCTCTGACCAGCGTACATTTACAAAACAATAATCTATCTGGGACCCTGGATGTTTTACAAGACCTTCCACTGCAAGATTTGAATGTTGAGAACAACCAGTTTGTTGGACCAATACCCCCGAAGCTGTTAAGCATCCCTAACTTTAGAAATGATGGAAACCCGTTTAATCTTAATGTCAACGCTACTATAGCCCCAGCACGTCCGCCTCGTTCTCCAGTGACGGTATCGCCATCAGGAACTGTGGTTTCTGGGACTCCATCCTCTGGACGTTTACCTACTAAACCTACTGATGGACCAACTGTAGCAAATGAATCAAATTCTGTGAAATCGAAAAAGAACACCAAAAGGGTGGTTTGGATATCTATTTCTGGTATATTGATGTTTGTTATTGTAGTACTGGGACTTCTTCTCTTTGTTCCAAGATGTAGCAGAAGAGAAAAGGTTAACAAAAGTTCCAAGCAACATCAAGTTGGCACATATGGAGGTGAAAGACAGAATCCTAGAGAATATGAGGATTCTGTTCAACCACCTAGTCAAACTGAGAAAGTACCAAAAGGTGCTGTGGTGAGGCCGAAAAGGAATCATCAAGAGGAGGCAAGGAGAGTGAGGGCAATTCCAAAGCTACAAGGCGAGCAAGAGAAGGATGAACAAAGAATGGGAACACTCCCAAAGCTGTTAGATCATGAGATAGATATGAGTTCACTGGGTGTATATTCCATGCCTTCTCCACCACCACCTCCTCCACCTCAACCACTTACTACTGAGAGTGTGCTTGTTGAACCAACCTCATTCCACAAAGGGGCTAACTTCAATCCTCCCAAAAAAAGTGCAGTTCCTCCCACTTTTGCAAAAACTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGTTTAGGAATGCTGGGGACTGTGTTTAAGGCAGAGCTTCCTGATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTGATCACCAAACAGATGATGAGTTTCTTGATTTGATAAACAACATTGACAGAATCCGGAATGCAAATATTGTTGAGCTTATTGGATATTGTGCAGAGCATGGTCAAAGGCTTCTTATTTATGAGTACTGTAGTAATGGTTCGCTGCAGGATGCACTCCATTCAGATGATGAATTCAAAACTAGACTGTCATGGAATGCTCGCATTCGGATAGCACTCGGTGCAGCTAGAGCCTTAGAGTACTTGCATGAGCAGTGTGCGCCACCTGTTGTACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATGTTTCTGTTCGTCTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGTTATGTAAGTCAGCTCTCAGGACAACTGCTAGCAGCTTATGGCTATGGAGCTCCAGAGTTTGAGTCAGGAATTTACACATACCAGAGTGATGTTTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTACGACAGAACACGTGCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCACAACTGCATGACATTGATGCATTATCAAAGATGGTTGATCCTTCTCTAAAAGGAGATTACCCAGCCAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCGGAGCCAGAATTTAGGCCAGCAATGTCAGAAGTGGTCTTGTACTTAATAAATATGATCAGGAAGGAATCTCAACAAAGTGAATCAAATGAATAA 2418 0.4214 MVRRLLSRESSEQKINIELGRTGEERSGSQYKRVKIHGEVLLGFLLICIVQFSHADTDPSDVAAINNLYTALGNPVLPGWVPSGGDPCGQAWQGVRCNGSVIQEITLNGANLGGELGEGLGSFVSIRAIVLNNNHIGGSIPSSLPVTLQHFFLSDNQFTGGIPASLSTLTELSDMSLNDNLLTGQIPDAFQSLTQLINLDLSNNNLSGELPPSMENLSALTSVHLQNNNLSGTLDVLQDLPLQDLNVENNQFVGPIPPKLLSIPNFRNDGNPFNLNVNATIAPARPPRSPVTVSPSGTVVSGTPSSGRLPTKPTDGPTVANESNSVKSKKNTKRVVWISISGILMFVIVVLGLLLFVPRCSRREKVNKSSKQHQVGTYGGERQNPREYEDSVQPPSQTEKVPKGAVVRPKRNHQEEARRVRAIPKLQGEQEKDEQRMGTLPKLLDHEIDMSSLGVYSMPSPPPPPPPQPLTTESVLVEPTSFHKGANFNPPKKSAVPPTFAKTFTIASLQQYTNSFSQDNLIGLGMLGTVFKAELPDGKILAVKKLDKRVSDHQTDDEFLDLINNIDRIRNANIVELIGYCAEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNARIRIALGAARALEYLHEQCAPPVVHRNFKSANILLDDDVSVRLSDCGLAPLITKGYVSQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRARGEQFLVRWAIPQLHDIDALSKMVDPSLKGDYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLINMIRKESQQSESNE 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01226 805 SUPERFAMILY Protein kinase-like (PK-like) 492 790 IPR011009 -
Phco10g01226 805 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 58 284 - -
Phco10g01226 805 Gene3D Ribonuclease Inhibitor 167 278 IPR032675 -
Phco10g01226 805 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 594 804 - -
Phco10g01226 805 ProSiteProfiles Protein kinase domain profile. 516 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01226 805 Gene3D Phosphorylase Kinase; domain 1 485 593 - -
Phco10g01226 805 Gene3D Ribonuclease Inhibitor 64 166 IPR032675 -
Phco10g01226 805 MobiDBLite consensus disorder prediction 404 438 - -
Phco10g01226 805 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 97 787 - -
Phco10g01226 805 Pfam Protein tyrosine and serine/threonine kinase 519 788 IPR001245 GO:0004672|GO:0006468
Phco10g01226 805 SUPERFAMILY L domain-like 57 265 - -
Phco10g01226 805 MobiDBLite consensus disorder prediction 291 328 - -
Phco10g01226 805 MobiDBLite consensus disorder prediction 363 438 - -
Phco10g01226 805 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 483 593 - -
Phco10g01226 805 Pfam Leucine rich repeat N-terminal domain 59 98 IPR013210 -
Phco10g01226 805 Gene3D Transferase(Phosphotransferase) domain 1 594 805 - -
Phco10g01226 805 MobiDBLite consensus disorder prediction 284 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01226 Phco-Chr10 34347917 34353670 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phco10g01226 PK_Tyr_Ser-Thr 6.5e-41 CL0016