Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01184 ATGGGGTGCATAGCTTCCAAGAGTGCTGCTGTTGACGACAGCAGGGAGGGTGTGGCAAGGGAATTGACTTCATCTAGCAGAAGGGCATCTGAGATGAAGGTTTCTGCATTGAGTTCCAAGAAAAGGGTCGATGGAGTTTGGGGGAAAGATAAGGTTTTAGATGGTGCTGATATGAAAGTGTCATTAATTGGCAAGGAATCTGTTGGTTCGATGCGGTTGTTTGATTATCAGAATGGGAAGAAGAAAAAGGAGAAACCTGAATCGGCTGCTCTTGATCATCCCGGTCTTGGAAGGGTTCCTAAGGGTTTAGAAGGAGAGCAAGTTGCAGCAGGTTGGCCAACTTGGCTTTCTTCAGTTGCTGGTGAAGCTATCCAAGGGTGGATACCACGGAGGGCAGATACTTTTGAGAGGTTTGGTAAAATTGGCCAAGGAACCTACAGTTCTGTGTATAAGGCACGTGATTTGACTCACCAAAAGGTCGTTGCATTGAAGAGGGTACGCTTTGATAATTTTGACGCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCTTGTTCTGCGTAGGCTTGACCATCCAAATATAATAAAGTTGGAAGGATTGATAACGTCGCAGACATCTCGCAGCCTGTACCTTGTTTTTGAATACATGGAACATGATCTTACAGGACTTGCATCAAGTCCTAGCATTAAGTTTTCCGAACCACAGGTTAAGTGCTACATGCAGCAGCTTCTCAGTGGATTGAATCATTGTCATAGTCGAGGTGTCCTCCACCGAGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGCACCTTAAAGATTGCAGATTTTGGTTTGGCAAATTTTATTGACCCCCATCACAAGGTTCCATTGACCAGCCGTGTAGTAACTTTGTGGTATAGACCACCAGAACTCTTACTCGGAGCATCTAATTACGGAGTTGCAGTAGATTTGTGGAGCACTGGTTGCATACTGGGGGAATTATATTGTGGCAGGCCTATTTTGCCTGGAAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAACTTTGTGGCTCACCATCGGAGGACTATTGGCGTAAGCTGCGATCACCACATTCAACAGTATTCAGGCCTCCCCACCATTATAGACGTTGTGTTGCAGAAACATTTAAAGAATATCCATCTGCTGTCGCAAGGCTCATCGAGTCCCTACTTGCTTTAGATCCCACACTTCGAGGAACAGCGGCTACAGCGCTGAAAAGTGAGTTCTTTTCAACGGAACCCCTTCCTTGCGATCCATCAAGCTTACCAAAATATCCTCCCTGCAAAGAGATTGACACTAAATTGTGGGAAGAAGCAACAAGGCAAGGAGCTGATGGGAGAAAGGAGAAGAAAAATGGACCAAGAGTTCGACAAGAGAAAGAACCACAGACATTTATTTTATCCAAAGACAATGAGTGCCCTCGCATATCAATGCAGCAAGGGCAACGCCTTCCAAACTCAAGGAGCCGGAACGAATTCTTTAACCCTCACAGGGAACCTGTTTCTGGACATTTGGTTTTTCCACAGAAACCATCAGAGGATTATAAAGCAACAGTAAATTATTTCTCGGGGCCTCTTTATCAGAGGCCTATGCATTCAGGTCCATTGGTTCCAGGCAATGGCTGGGAAATGGCTGGAAAGGAAGCTGGTGAGCAGCCTCAAGTTTCAAACAAAGTCAACCTACCAAAACTATCTGGAGTGGCATCTAGGACTTCATTGTCCGGAGATAAAAAGGAAAACCATGTTTCTTCGAGGCCCCAAGAAGCAATTCAAGCACAAAGATCTTTGGAGTCAACTAATGTGGGATCAGATTCAAGAAGAAGGCATGATAAAAAACGCCATTCTCAGAGAATTGATCACAGGCAAATCGAAAACGCCAAAGTCTCAACTCAAACACAAATTCTGGAGGGGCATGGAGCCATGGGAAACAATATTGGCCACCTCTCTGGTCCATTACTGGTTTCATCAAACAATATGGATCAGATGCTCAAAGAGCGTGATCGAAAGATCCAAGAATATTCGAGACGAGCACGAATGTACAAGTCAGGTGAAATAGCTCGTGCAAACCAAAATTAG 2103 0.4446 MGCIASKSAAVDDSREGVARELTSSSRRASEMKVSALSSKKRVDGVWGKDKVLDGADMKVSLIGKESVGSMRLFDYQNGKKKKEKPESAALDHPGLGRVPKGLEGEQVAAGWPTWLSSVAGEAIQGWIPRRADTFERFGKIGQGTYSSVYKARDLTHQKVVALKRVRFDNFDAESVKFMAREILVLRRLDHPNIIKLEGLITSQTSRSLYLVFEYMEHDLTGLASSPSIKFSEPQVKCYMQQLLSGLNHCHSRGVLHRDIKGSNLLIDNNGTLKIADFGLANFIDPHHKVPLTSRVVTLWYRPPELLLGASNYGVAVDLWSTGCILGELYCGRPILPGKTEVEQLHRIFKLCGSPSEDYWRKLRSPHSTVFRPPHHYRRCVAETFKEYPSAVARLIESLLALDPTLRGTAATALKSEFFSTEPLPCDPSSLPKYPPCKEIDTKLWEEATRQGADGRKEKKNGPRVRQEKEPQTFILSKDNECPRISMQQGQRLPNSRSRNEFFNPHREPVSGHLVFPQKPSEDYKATVNYFSGPLYQRPMHSGPLVPGNGWEMAGKEAGEQPQVSNKVNLPKLSGVASRTSLSGDKKENHVSSRPQEAIQAQRSLESTNVGSDSRRRHDKKRHSQRIDHRQIENAKVSTQTQILEGHGAMGNNIGHLSGPLLVSSNNMDQMLKERDRKIQEYSRRARMYKSGEIARANQN 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01184 700 MobiDBLite consensus disorder prediction 14 33 - -
Phco10g01184 700 Gene3D Phosphorylase Kinase; domain 1 122 217 - -
Phco10g01184 700 MobiDBLite consensus disorder prediction 78 97 - -
Phco10g01184 700 MobiDBLite consensus disorder prediction 448 473 - -
Phco10g01184 700 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Phco10g01184 700 CDD STKc_CDK9_like 135 419 - -
Phco10g01184 700 MobiDBLite consensus disorder prediction 547 628 - -
Phco10g01184 700 Gene3D Transferase(Phosphotransferase) domain 1 218 458 - -
Phco10g01184 700 Pfam Protein kinase domain 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01184 700 MobiDBLite consensus disorder prediction 594 609 - -
Phco10g01184 700 MobiDBLite consensus disorder prediction 562 582 - -
Phco10g01184 700 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01184 700 FunFam probable serine/threonine-protein kinase At1g54610 218 459 - -
Phco10g01184 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Phco10g01184 700 PANTHER CELL DIVISION PROTEIN KINASE 133 425 - -
Phco10g01184 700 SMART serkin_6 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01184 700 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Phco10g01184 700 SUPERFAMILY Protein kinase-like (PK-like) 128 427 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01184 Phco-Chr10 33962557 33967513 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Phco10g01184 Pkinase 1.2e-68 CL0016