Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01183 ATGTCTCCACTGAAGCTCCTTGTCATTCTTCTTCACATTGCAACCACTTTGAGCACAGTTTCCACTACCGAATTTGTCTATAACACAAACTTCAACTCCACAAACATCATCCTATATGGAAATGCCTCTATACAGTCCTCCATTCTGACTCTCACAAATTCGACTTTCTTTTCCATAGGCCGTGCTTTTTACCCTCACAAAATACCTACCAAAAAAGCCAACTCTCCCACTTTGCTCCCCTTTGCAACCTCCTTCATTTTCTCAATTGCTCCCATTAAAAACTTTATCACTGGCCATGGCTTTGTCTTCCTATTCACACCATCAAGAGGTGTAAATGGTACGACTGCAGCTGAGTATATCGGTCTTTTCAATCTTAGCAATGAGGGCAATCCTCAGAACCATGTTTTTGGAGTTGAGTTTGATATAGTTAGAAATGTAGAAGAGTTCAATGATATTAGTGATAACCATGTTGGTGTTGACATAAACTCGCTTCGCTCCTTAACTTCTCATGAAGCTGGCAATTGGGGAGGAAAAGGTGACAAAGAATTTAAGGTGTTGGAGCTAAAAAATGGAGAAAACTATCAGGTATGGATTGAATTTATGAACTCCCAACTTAACGTTACTATAACTCGGGCAGGACGAAGGAAGCCTAGAGTGCCTCTTATCAGTAGTAAAGTTAACCTTTCAGGGGTTCTTATGGATGAAACATATGTTGGATTCACAGCAGCAACAGGGAAGTTAGTAGACTGTACCAGGATTCTTGCTTGGAGTTTTAGTAATTCAAATTTTTCAATAGGTGATGCGTTGGTGACAGAAGATTTGCCTTCATTTGTACATCATAAAAAGTGGTTTTTTGAAGGGCGAGATTTGGCTCTAGGTGGGAGCATGATTTTGTGTGTGTTAATCATTGGCTGTGGTTATGTAGTATTTTTCATTCTGCGCAGAAGCAAGACACAAGAAGAAGTTGAGGACTGGGAACTGGAGTATTGGCCACATAGGATTGGTTTCCATGATATTTATGCAGCAACAAGAGGGTTCTCTGAAGAGAATGTGGTTGCTGTTGGAGGGAACGGGAAGGTGTATAAAGGGGTTTTGCATGGAGCAGAAGTTGCAGTGAAGAGAATCCCTCGAGAAAGGGAAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAATTCTAGGCAGAATGAAGCACAAAAATTTAGTAGGATTGAGAGGTTGGTGCAAAAAAGAGAGGGGAAATTTGATTCTAGTTTATGACTTCATGAGCAAGGGAAGTTTAGACAAAAGAATATTTGAGTGTGAAGAGAGAATGGTGCTGACATGGGAAGAGAGGATTCAAGTCTTGAAAAATGTAGCCACAGGAATTCTATACCTGCATGAAGGTTGGGAAGTCAAGGTCTTGCATAGGGACATTAAAGCATGCAATGTTCTTCTTGACAAGGACATGAATGCAAGGCTGGGAGATTTTGGATTGGCTCGTATGCATGATCATCATGGGCAAGTTGCAAGCACAACAAGAGTAATTGGGACAATAGGATACATTGCCCCTGAAGTGATTCGAACAGGAACAGTATCAACTATGTCTGACGTGTTTGGTTTTGGAATATTGGTATTGGAAGTAATTTGCGGGAGAAGATCAATTGAAGAACATAAACCAGGTCTTATTGATTGGTTGATGTCTTTAATGGAGCAAGGCCAATTGCATAGTGCTGTTGATGAAAGGTTGAAGGCTAAATGGGGATACACCACAGAGGAAGCTGAAAGATTGCTTCATTTGGGTTTGTTGTGTTCAAATTCAGATCCTAGCATTAGACCAACGATGAGGCAGGTTGTGAAAATGCTGGAGGGGGAAATAGACAACACTGATGAAGAAAACATGGAGACGAGTTTGCTTGGAAAAGTAAAATCAGCTGCAATGTGGTCTAAAACCGAATGTGCTTTTCCATGCAGTGGTTACCCAACTTTTGAGGAAATTAATATGTTCAGTTTTAATTCTTGGACCTCTGGAAGTGGCTCACGTACTTTTCCAGGATCAGAATCAGAAATCATCAAAGTAAACAGATGA 2067 0.4069 MSPLKLLVILLHIATTLSTVSTTEFVYNTNFNSTNIILYGNASIQSSILTLTNSTFFSIGRAFYPHKIPTKKANSPTLLPFATSFIFSIAPIKNFITGHGFVFLFTPSRGVNGTTAAEYIGLFNLSNEGNPQNHVFGVEFDIVRNVEEFNDISDNHVGVDINSLRSLTSHEAGNWGGKGDKEFKVLELKNGENYQVWIEFMNSQLNVTITRAGRRKPRVPLISSKVNLSGVLMDETYVGFTAATGKLVDCTRILAWSFSNSNFSIGDALVTEDLPSFVHHKKWFFEGRDLALGGSMILCVLIIGCGYVVFFILRRSKTQEEVEDWELEYWPHRIGFHDIYAATRGFSEENVVAVGGNGKVYKGVLHGAEVAVKRIPREREEGMREFLAEVSILGRMKHKNLVGLRGWCKKERGNLILVYDFMSKGSLDKRIFECEERMVLTWEERIQVLKNVATGILYLHEGWEVKVLHRDIKACNVLLDKDMNARLGDFGLARMHDHHGQVASTTRVIGTIGYIAPEVIRTGTVSTMSDVFGFGILVLEVICGRRSIEEHKPGLIDWLMSLMEQGQLHSAVDERLKAKWGYTTEEAERLLHLGLLCSNSDPSIRPTMRQVVKMLEGEIDNTDEENMETSLLGKVKSAAMWSKTECAFPCSGYPTFEEINMFSFNSWTSGSGSRTFPGSESEIIKVNR 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01183 688 PANTHER - 40 619 - -
Phco10g01183 688 SUPERFAMILY Protein kinase-like (PK-like) 321 616 IPR011009 -
Phco10g01183 688 Gene3D Transferase(Phosphotransferase) domain 1 422 638 - -
Phco10g01183 688 ProSiteProfiles Protein kinase domain profile. 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01183 688 Gene3D Phosphorylase Kinase; domain 1 309 421 - -
Phco10g01183 688 CDD STKc_IRAK 355 617 - -
Phco10g01183 688 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 308 421 - -
Phco10g01183 688 SMART serkin_6 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01183 688 Gene3D - 21 266 - -
Phco10g01183 688 Pfam Protein kinase domain 350 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01183 688 Pfam Legume lectin domain 23 262 IPR001220 GO:0030246
Phco10g01183 688 FunFam L-type lectin-domain containing receptor kinase S.4 21 266 - -
Phco10g01183 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 261 IPR013320 -
Phco10g01183 688 FunFam L-type lectin-domain containing receptor kinase S.4 422 628 - -
Phco10g01183 688 CDD lectin_legume_LecRK_Arcelin_ConA 23 261 IPR001220 GO:0030246
Phco10g01183 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01183 Phco-Chr10 33956793 33958859 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco10g01183 Pkinase 5.3e-44 CL0016