Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01182 ATGTCTTCTCGTACTTTGTTTTTCCTTGTCCTTAATTTGGTTCTTCAACTTTTGACTTCATTATCCGCTAATGAATTTGTCTATAACAAAAACTTCAACTCCTCTAATGTGAAACTCTTTGGGAATGCCACCATCCAGAACTCAATTCTCGGGCTCACAAACAAAACTTTCTTCTCCATAGGACGAGCCTTTTACCCTCACAAAATACAAGTGAAGCAACCAAACTCTTCCACTGTTCTTCCCTTTGCAACTTCCTTCATCTTCTCTGTTGCACCTTGTGAGAACTTCCCTGTTGCTCATGGTTTTGCTTTTGTTTTCTCGCCGGTGATGGACGTAAATGGAGCACTCTCGGGGAACTACTTGGGCCTGTTTAACCGTTCCACTTCAGGTAACTCTTCCAACCATGTTTTTGCGGTTGAGTTTGATGATTTTAGGAACGAGGAGTTCAATGAGAAGAATGATAATCATGTGGGCGTGGACTTGAATTCGATGATTTCGGAGTATTCTGAGCCTGCCGGGTTCTGGGGTGGGAGAGACGGCGAGGATTGGGAGGATTTGAAACTGGCTGATGGTAGAAACTATCAGATTTGGATTGATTTTGAGGATTCAGTGATTAATGTTACTATGGCACCAGCAGGGAAAAAGAAGCCTCGCAGACCTTTGATCAGTAAGCCTATTGACCTTTCTTGGGTCTTGTTGGATGAAATGTATGTGGGGTTTTCGGGATCAACAGGGAGAATGGTGGACAATTGTAGAATCTTGGCTTGGAGTTTTAGCAATTCCAACTTTTCAATTGGTGATGCTTTGGATACCAAGCATTTACCCTTGTACGTGCATCCGAAAACGTTGCTGTTTAGATCAAATGGTTTCATTATAGGTGTAACTTTCGGGGCATTTCTTATGGGGGGCTTCTGTGCTTTGGTGTTTTTTTATAGTTTGTTCAAAACCAGAAGGGAAGAGAAGCAGGAAAATTTTGAAGACTGGGAATTGGAGTATTGGCCACACAGGATTAGCTATCAGGAGATCTGTGATGCAACAAGTGGATTCTCTGAAGAGAAAGTGATTGGGATTGGAACAAGTGGCAAAGTATACAAGGGAGTTTTGAAGGGAGTAGAAGTTGCAGTGAAGAGCATCAATCACGAGACACGGCATGGAATGAGAGAGTTTCTGGCAGAGATTTCAAGCCTTGGCAGAATGAAGCACAGGAATTTAGTGGGTTTCAGAGGTTGGAGCAGAAGAAAAGGAGGAAAACTTATACTGGTTTATGATTACATGGTGAATGAAAGCTTGGACAAAAGGATCTTTGAGTGTGAAGATGCAATGCTGCTGAGCTGGGAAGAAAGAATTAGAGTTTTGCAAAATGTAGCTGATGGGATTTTATACCTACATGAGGGTTGGGAAGTTGAGGTCTTGCATAGGGACATCAAAGCTTGTAATGTACTACTTGACAAAGACATGAATGCTAGATTGGGGGATTTCGGGCTTGCAAGGCTGCATCACCAGGAACATGTGGCTGACACAACAAAAGTGATAGGGACTCTGGGGTACATGGCACCGGAACTAGTTCGAATTGGGCGACCATCAGCTGCGTGTGATGTGTTTAGCTTTGGAGTATTGGTTCTAGAAGTGGTGTGTGGGAGAAGACCCATCATAGCAAATCAGCCACCATTGGTTGATTGGGTGTTTTCCCTAATAGAGAAAGGGGAGTTGAGTTGTGCTATTGATGAGCGTTTGAAGGGTCAAAGTGGTTATAATGCTGAGGAAGCTGAAAGGATGCTTCATTTGGGTTTGTTGTGTGTAGATACTGACCCTGTTGTTAGGCCAACAATGAGGCAAGTGGTGAAAACATTGGAGGGAATAAAATGCACTGAGTGCAACGAAGAGTGCATCCATTTGGGTCTGCTAGGAAAAATAAACTCAGCAGCATCATGGTCAAAAAGTTCTACAAGTTCTTCCTATGTAAATTATCCTACCTTTGATGAAATTTTGCAGACCAAGTTTTATTCTACAGCATCTTTAAGCGTCTCTTGTCCCAGCCCACAGCCACAGTCAGAGTTTGTCTCAGAAGGAAGGTGA 2076 0.4292 MSSRTLFFLVLNLVLQLLTSLSANEFVYNKNFNSSNVKLFGNATIQNSILGLTNKTFFSIGRAFYPHKIQVKQPNSSTVLPFATSFIFSVAPCENFPVAHGFAFVFSPVMDVNGALSGNYLGLFNRSTSGNSSNHVFAVEFDDFRNEEFNEKNDNHVGVDLNSMISEYSEPAGFWGGRDGEDWEDLKLADGRNYQIWIDFEDSVINVTMAPAGKKKPRRPLISKPIDLSWVLLDEMYVGFSGSTGRMVDNCRILAWSFSNSNFSIGDALDTKHLPLYVHPKTLLFRSNGFIIGVTFGAFLMGGFCALVFFYSLFKTRREEKQENFEDWELEYWPHRISYQEICDATSGFSEEKVIGIGTSGKVYKGVLKGVEVAVKSINHETRHGMREFLAEISSLGRMKHRNLVGFRGWSRRKGGKLILVYDYMVNESLDKRIFECEDAMLLSWEERIRVLQNVADGILYLHEGWEVEVLHRDIKACNVLLDKDMNARLGDFGLARLHHQEHVADTTKVIGTLGYMAPELVRIGRPSAACDVFSFGVLVLEVVCGRRPIIANQPPLVDWVFSLIEKGELSCAIDERLKGQSGYNAEEAERMLHLGLLCVDTDPVVRPTMRQVVKTLEGIKCTECNEECIHLGLLGKINSAASWSKSSTSSSYVNYPTFDEILQTKFYSTASLSVSCPSPQPQSEFVSEGR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01182 691 CDD lectin_legume_LecRK_Arcelin_ConA 25 261 IPR001220 GO:0030246
Phco10g01182 691 ProSitePatterns Protein kinases ATP-binding region signature. 355 376 IPR017441 GO:0005524
Phco10g01182 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Phco10g01182 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 264 IPR013320 -
Phco10g01182 691 Gene3D - 23 271 - -
Phco10g01182 691 Pfam Legume lectin domain 24 262 IPR001220 GO:0030246
Phco10g01182 691 FunFam L-type lectin-domain containing receptor kinase S.4 22 266 - -
Phco10g01182 691 SMART serkin_6 349 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01182 691 Gene3D Transferase(Phosphotransferase) domain 1 425 631 - -
Phco10g01182 691 PANTHER - 41 619 - -
Phco10g01182 691 Gene3D Phosphorylase Kinase; domain 1 311 424 - -
Phco10g01182 691 Pfam Protein kinase domain 350 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01182 691 FunFam L-type lectin-domain containing receptor kinase S.4 425 629 - -
Phco10g01182 691 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 312 424 - -
Phco10g01182 691 SUPERFAMILY Protein kinase-like (PK-like) 323 618 IPR011009 -
Phco10g01182 691 ProSiteProfiles Protein kinase domain profile. 349 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01182 Phco-Chr10 33953474 33955549 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco10g01182 Pkinase 2.3e-43 CL0016