Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco10g01163 | ATGCTGGCGGTGTCACCTTTGAGGAGCAGAAGAGATGAAGAGCAAGGGGAGATGGAGAGTTTCTCCATTGGAACTGATGACTTTGCTGACCTTTCAGAAGGGAACTTGCTTGAAAGCATCAACTTTGATGATCTCTTCATGGGAATCAACGATGACGAAGATGTCTTGCCAGATCTGGAGATGGACCCTGAATTGCTTGCTGAGTTCTCCCTCAGTGAGGAATCGGAGATAGTCTCATCAGTTTCAGTGGCAAATAACAAATCTGATGACAGAAGTGAGAATAATATAGTTACTACAGAGAAACAAAATGAGGTTATAGCAGCCAATTTTTGTTCGGATTCTGGTTCCAATTCGGGGTCAAGTAGAGGGGAAGAGATAGGAAGCAAGAGTGGTGAATCAACTCATTCAGTGGGGGTGAATCCATCCCCTAAGGAAAGTGAGAAAGGAAGAAAACCATCAACCCATTCAAGGAATAATCAGCAAGGGAAGAGAAAGGTAAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAGCAGCTAGGAGTGGATAAGGCTGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGTCTCACCCGCCATAACATTGCCAGCCATCTTCAAAAATATCGATCTCATAGGAAGCATTTGATAGCACGTGAAGCTGAAGCAGCAAGGTGGAGTCAAAGGAAACAATTCATGGGTGCAGCAACTGTAGGTAGAGGAGGAGGAGGAGGTAAGAGAGACGTGAACCCTTGGCTTGCACCTACCATGGGTTTCCCTCCCATGACACCAATGCACCATTTTAGGCCTTTACATGTATGGGGACATCACACCATGGACCAGTCCTTCATGCACATGTGGCCTAAACATCTCCCATATTCACCGTCTCCGCCGGCATGGCCACCGCGAACAGTTCCATCTCCGCCGCCGCCGGACCCTCTTTATTGGCACCAACATCAACGGGCTCCAAACGCACCAACACCAGGAACACCGTGTTTTCCACAGTCTCTGACAACCACGAGATTTGGCTCTCAAACTGTTCCGGGCATCCCACCACACCATGCAATGTTCCAAATGGTAGTAGATCCAGGCATTGCCATCCCAGCCACCCAACCAACACCTCGACCCCTCCTCGATTTTCATCCGTCAAAGGAGAGCATAGATGCTGCTATTAGTGATGTTTTATCAAAACCATGGTTGCCACTACCCCTTGGCCTTAAAGCTCCAGCAGTTGAAGGTGTAATGGGTGAACTACAAAGACAAGGGATTCCCAAAATCCCTCCCTCTTGTGCTTGA | 1317 | 0.4806 | MLAVSPLRSRRDEEQGEMESFSIGTDDFADLSEGNLLESINFDDLFMGINDDEDVLPDLEMDPELLAEFSLSEESEIVSSVSVANNKSDDRSENNIVTTEKQNEVIAANFCSDSGSNSGSSRGEEIGSKSGESTHSVGVNPSPKESEKGRKPSTHSRNNQQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLIAREAEAARWSQRKQFMGAATVGRGGGGGKRDVNPWLAPTMGFPPMTPMHHFRPLHVWGHHTMDQSFMHMWPKHLPYSPSPPAWPPRTVPSPPPPDPLYWHQHQRAPNAPTPGTPCFPQSLTTTRFGSQTVPGIPPHHAMFQMVVDPGIAIPATQPTPRPLLDFHPSKESIDAAISDVLSKPWLPLPLGLKAPAVEGVMGELQRQGIPKIPPSCA | 438 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco10g01163 | 438 | MobiDBLite | consensus disorder prediction | 109 | 141 | - | - | |
Phco10g01163 | 438 | FunFam | Two-component response regulator | 160 | 224 | - | - | |
Phco10g01163 | 438 | PANTHER | TRANSCRIPTION ACTIVATOR GLK1 | 1 | 437 | IPR044825 | GO:0003700|GO:0045893 | |
Phco10g01163 | 438 | Pfam | Myb-like DNA-binding domain | 168 | 217 | IPR001005 | - | |
Phco10g01163 | 438 | MobiDBLite | consensus disorder prediction | 81 | 100 | - | - | |
Phco10g01163 | 438 | Gene3D | - | 162 | 223 | - | - | |
Phco10g01163 | 438 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 162 | 221 | IPR017930 | - | |
Phco10g01163 | 438 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 165 | 219 | IPR006447 | GO:0003677 | |
Phco10g01163 | 438 | SUPERFAMILY | Homeodomain-like | 163 | 222 | IPR009057 | - | |
Phco10g01163 | 438 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Phco10g01163 | 438 | MobiDBLite | consensus disorder prediction | 109 | 168 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco10g01163 | Phco-Chr10 | 33639870 | 33643237 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Phco10g01163 | Myb_DNA-binding | 5.7e-08 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco10g01163 | 10 | 33639870 | 33643237 | Phco10g01163 | 10 | 33639870 | 33643237 | ECH |