Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01111 ATGGACTCCATCGCCGGAGCTCCGCCTCACACAGCAAACCCTCCACCGTCTCGGCCGTCGCCGTTCCCCGGCCGGGAAGACTGCTGGTCGGAGGAAGCCACGTTCACGCTCATCGAGGCGTGGGGCGAGCGCCACCTCGAACTCAACCGCGGGAACCTCCGCCAGAGGCACTGGCAGGAGGTCGCCGACACCGTCAACGCACGTCACGGCCACGCCGGCGCCAGGGCCCGCCGCACCGACGTGCAGTGCAAGAACCGTATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGATTCCGGCGATTCCGCCACCACCTGGCCGTTCTTTCGCCGCCTCGAGTTCCTCGTCGGCGACAATTTCCCGGCGAAGAAGCCCTCCCCGCCGGAGGCAACATCCGCCGATCGACGGAGCACTCCTCCGGCGAAGTCCCCGTCGTGGGCCCTCATTCCGGTCGGTCCTCGATCCCGCTCGCAGAAGCGGCCGACGCCGGCGGCGCCGGCGGCAGAGAGCGTCGCCGACTCGTACTTCCGGCGGAATTTCTCGGTTTTTGCTGCGGCGGCGGCCGCAGCCGCTGAGGCCGACAGCGATAATTCGAACGGTTCTAAATGGAGCAGTGGGAGTGAGAAGAGAGAGAAGAAGAAAAGAGGAAGGGATTGGGAATTTGGTTACAGAGAGGTCGCAGAAGCGTTGGAGAGGTTTGGGGAGATTTATGAGAGAGTTGAAGAAGCTAAACAGAGGCAAATGGTTGAGTTGGAGAAACAGAGAATGCAGTTTGCTAAGGATTTGGAAACCCAGAGAATGAAACTCTTCATGGAAACTCAGCTTCACTTGCAAAAAATGAATCGCTCCAACTCCAAACGTTCTTCTGCAACTGGTTAG 894 0.5984 MDSIAGAPPHTANPPPSRPSPFPGREDCWSEEATFTLIEAWGERHLELNRGNLRQRHWQEVADTVNARHGHAGARARRTDVQCKNRIDTLKKKYKIEKARVSDSGDSATTWPFFRRLEFLVGDNFPAKKPSPPEATSADRRSTPPAKSPSWALIPVGPRSRSQKRPTPAAPAAESVADSYFRRNFSVFAAAAAAAAEADSDNSNGSKWSSGSEKREKKKRGRDWEFGYREVAEALERFGEIYERVEEAKQRQMVELEKQRMQFAKDLETQRMKLFMETQLHLQKMNRSNSKRSSATG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01111 297 Pfam Myb/SANT-like DNA-binding domain 26 119 IPR044822 -
Phco10g01111 297 MobiDBLite consensus disorder prediction 196 221 - -
Phco10g01111 297 MobiDBLite consensus disorder prediction 1 26 - -
Phco10g01111 297 Gene3D - 29 96 - -
Phco10g01111 297 FunFam trihelix transcription factor ASIL2 29 96 - -
Phco10g01111 297 SMART 118neu2 36 125 IPR006578 -
Phco10g01111 297 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 289 IPR044823 -
Phco10g01111 297 MobiDBLite consensus disorder prediction 125 171 - -
Phco10g01111 297 Coils Coil 231 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01111 Phco-Chr10 32801513 32802406 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco10g01111 Myb_DNA-bind_4 1.5e-25 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01111 10 32801513 32802406 Phco10g01111 10 32801513 32802406 ECH