Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01105 ATGGATGAGAGAAATTGTATATCTGAGGAAGACAAGAGTGAAAGTAGCAAACCCTCTTCTGCAATTCATAGAAGAAAACGTTCATTCTTGGATTTGAATGAAGAAGCTGCGGATGATGGAGATGGTAGCACAAGTGATGACCCCATCAGTATCAATGACATATCATCTCAAGAGGGTAATTTGAGCAGTAATAACAACTCAAGTGAAGAAGGGAAAGAGCGCGCAACTGCTGTTAGGCAATATGTTCGGTCCAAAATGCCAAGACTCCGTTGGACTCCTGATCTTCATTTAGCTTTTGTGCATGCTGTTGAGAGGCTTGGTGGACAAGAAAGAGCAACGCCCAAGTTGGTTCTCCAGTTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAGAGCCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTATCTCAGAATAAGGCAATGCAAGGAAGGCATAGTATTTTCGATATGTACGGAAGACTTAATGCCCCACGACACTTTGTGATTGATAACAGAAATTATATTCCATCATCTCTGCTCATTCAACAATCACCTTATCAGATCAGTGCTCATGGCTCCTCAAGATCACACCCCACAGGGTTTTTCAATGGTCACATGATGATAAGATCAAGTTCAGTGTGGGACAAAGATTTGTGTAATTATCAGTATCAACGTAGTTCTTGCAGTCCTAACTTCGCTGGCCACGCCACGTTTGATGCCGAGGTTCGTGATGTGAAAAGTCGAATGCCAGAATTCCTAAATCAGGTTCAAGGGTGGAAACAAGGTCAAGTAAAAGATCAATTAGAGAGGTTGAATGAGAAACAAGGGCCTCCAAGTTTTTTGGAGCTGAATTTAAGTCAAGATTCAAGAAACATTAATAGTGATGAGCAGATGAAGAAAGATCCAGCAGAAAGTGAACAAGAAATTAATACCAGACTCTCTCTTTCACTGTTCACTTGTTCCTCCTCAAATTCACCACAACAAGCACAATGTAGTGAAAATCATAAAGACGATACCCATGTTGAGAGTTTTTGTTTACAAAATTATGCACCAAGGAGTCGTTTGGGCTGA 1095 0.4082 MDERNCISEEDKSESSKPSSAIHRRKRSFLDLNEEAADDGDGSTSDDPISINDISSQEGNLSSNNNSSEEGKERATAVRQYVRSKMPRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNKAMQGRHSIFDMYGRLNAPRHFVIDNRNYIPSSLLIQQSPYQISAHGSSRSHPTGFFNGHMMIRSSSVWDKDLCNYQYQRSSCSPNFAGHATFDAEVRDVKSRMPEFLNQVQGWKQGQVKDQLERLNEKQGPPSFLELNLSQDSRNINSDEQMKKDPAESEQEINTRLSLSLFTCSSSNSPQQAQCSENHKDDTHVESFCLQNYAPRSRLG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01105 364 MobiDBLite consensus disorder prediction 45 71 - -
Phco10g01105 364 MobiDBLite consensus disorder prediction 301 315 - -
Phco10g01105 364 Gene3D - 86 143 - -
Phco10g01105 364 MobiDBLite consensus disorder prediction 296 316 - -
Phco10g01105 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 64 246 IPR046955 GO:0003700
Phco10g01105 364 Pfam Myb-like DNA-binding domain 89 139 IPR001005 -
Phco10g01105 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 143 IPR017930 -
Phco10g01105 364 MobiDBLite consensus disorder prediction 1 77 - -
Phco10g01105 364 MobiDBLite consensus disorder prediction 1 34 - -
Phco10g01105 364 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 142 IPR006447 GO:0003677
Phco10g01105 364 SUPERFAMILY Homeodomain-like 85 141 IPR009057 -
Phco10g01105 364 FunFam Myb family transcription factor 85 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01105 Phco-Chr10 32714073 32717070 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco10g01105 Myb_DNA-binding 5.8e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01105 10 32714073 32717070 Phco10g01105 10 32714073 32717070 ECH