Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01099 ATGGACGAAGATTACGGCTACAGAAGGAAGGCCAAGATTGCACTCATCGCCATTATGGTCCTCGCTTCCCTCGCCGTCTTTGCCTTGCTCGTTGCCTTTGCTTACTACTGCTACATCCTCAACAAGGTCTCCAACCGCCGCAAAAGCCTCAAAAAAGTTGAAGACGCTAACCTTAATGAGAATAGTGACTTTGCAAATCTGCAAGTTATTGCCGAGAAAGGACTTCAGGTGTTCACTTTCAAGCAGCTGCATTCTGCAACAGGTGGCTTCAGCAAGTCGAATGTCATTGGTCATGGTGGATTTGGACTTGTTTACCGAGGAGTGCTCAATAATGGCAGGAAAGTTGCAATTAAATTCATGGATCAGGCAGGAAAGCAAGGGGAAGAAGAATTTAAAGTAGAGGTGGAATTGCTAAGGCGGTTGCATTCACCATATCTGCTGGCATTGCTTGGGTACTGCTCTGATAGTAATCATAAATTGCTAGTGTATGAATTTATGGCAAATGGTGGACTGCAGGAACATCTCTATCCTGTTAGCAATTCTATAATAACACCCATAAAGTTGGATTGGGAAACTCGGTTAAGAATAGCACTTGAAGCTGCAAAGGGATTGGAATATCTTCATGAGCATGTCAGTCCCCCAGTTATTCACAGAGATTTTAAGAGCAGTAACATCCTCTTGGATAAGAAATTTCATGCCAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGACCTGATAGAGCTGGTGGACATGTTTCAACTCGAGTTTTGGGCACCCAAGGATATGTTGCCCCTGAATATGCACTAACAGGGCATTTAACCACAAAATCAGATGTGTACAGTTATGGTGTCGTACTTTTAGAGCTGCTCACTGGCCGAGTGCCAGTAGATATGAAGAGACCTCCAGGAGAAGGTGTTCTTGTTTCTTGGGCTCTGCCTCTTTTGACTGATAGAGAAAAGGTTGTCAAGATTATGGATCTTTCATTAGAAGGACAGTACTCCATGAAAGAGGTTGTCCAGGTGGCTGCAATTGCTGCAATGTGTGTGCAACCAGAGGCAGATTATCGTCCTCTCATGGCAGATGTTGTGCAGTCATTGGTTCCACTGGTGAAGACTCAAAGGTCCCCTTCAAAGGTGGGAAGCTGCTCTAGTTTCCACTCCCCCAAGTTGTCCCCCGGCCCAACATCCAGTTAG 1194 0.4497 MDEDYGYRRKAKIALIAIMVLASLAVFALLVAFAYYCYILNKVSNRRKSLKKVEDANLNENSDFANLQVIAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGLVYRGVLNNGRKVAIKFMDQAGKQGEEEFKVEVELLRRLHSPYLLALLGYCSDSNHKLLVYEFMANGGLQEHLYPVSNSIITPIKLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGPDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREKVVKIMDLSLEGQYSMKEVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTQRSPSKVGSCSSFHSPKLSPGPTSS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01099 397 SUPERFAMILY Protein kinase-like (PK-like) 72 366 IPR011009 -
Phco10g01099 397 FunFam Serine/threonine-protein kinase PBS1 57 165 - -
Phco10g01099 397 Pfam Protein kinase domain 91 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01099 397 MobiDBLite consensus disorder prediction 375 397 - -
Phco10g01099 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Phco10g01099 397 Gene3D Transferase(Phosphotransferase) domain 1 166 382 - -
Phco10g01099 397 Gene3D Phosphorylase Kinase; domain 1 50 165 - -
Phco10g01099 397 PANTHER OS07G0668900 PROTEIN 63 375 - -
Phco10g01099 397 ProSiteProfiles Protein kinase domain profile. 90 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01099 397 CDD STKc_IRAK 96 369 - -
Phco10g01099 397 FunFam Receptor-like serine/threonine-protein kinase ALE2 166 383 - -
Phco10g01099 397 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01099 Phco-Chr10 32615851 32620252 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Phco10g01099 Pkinase 9.1e-44 CL0016