Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01097 ATGGCCTCTATGCCGTTGGGGCAGCAGCAACAGCTTCAACCACCGCAAGTGGCAACTCCGCCTCAACAACCGCCGCAAACGGAGAATGACTCTATGAAAGTGGACTCTCGCGGCGGCTCTGACGCCGCCTCCAATAAGGAAATGTCTGCTCCTGTTGCAGAGGGTAATGAAGCACATGCACTCACTGGTCATATAATCTCAACCACCATTGGTGGCAAAAATGGTGAACCTAAACGAACTATCAGTTACATGGCCGAACGTGTTGTAGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGATACAAAAACCGTGAACTGCAGTTGATGCGCATGATGGATCACCCAAATGTAATTTCCCTGAGGCACTGTTTCTTCTCTACAACAAGCAGAGATGAGCTTTTTCTGAACTTGGTGATGGAATATGTCCCTGAGACGATCTTCCGAGTTATAAAGCACTACAGTAGTATAAACCAGAGAATTCCCCTAATCTATGTGAAGTTATATACATATCAAATCTTTAGGGGACTGGCCTATATCCATACCGTACCAGGAGTTTGCCATAGGGATGTGAAACCTCAAAATCTTTTGGTGGATCCACTCACACATCAAGTCAAGCTTTGCGATTTTGGGAGTGCAAAAGTCCTGGTGAAGGGTGAATCGAACATCTCATACATATGCTCACGGTACTATAGGGCCCCAGAATTAATATTTGGTGCGACAGAGTACACAACTTCTGTTGATATCTGGTCAGCTGGTTGTGTCCTTGCAGAACTTCTTTTAGGCCAGCCTTTGTTCCCGGGAGAAAATCAGGTCGACCAACTTGTTGAAATTATCAAGGTCCTTGGCACTCCTACTCGAGAAGAAATTCGATGCATGAACCCTAATTATACAGATTTCAGATTCCCCCATATCAAAGCTCATCCTTGGCATAAGGTTTTTCACAAACGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTTCAATATTCACCAAAACTTCGTTACACCGCAGTGGAAGCATTGGCACATCCTTTCTTTGACGAGCTTCGTGAGCCCAATGCTCGGCTACCTAATGGTCGTTTATTGCCTCCACTTTTTAACTTCAAACAGGAATTAGATGGAGCGCCCCCTGAACTGCTTCCTAAGCTCATCCCGGAGCACGTCAGACGGCAGATCGGTTTCGGCTTGCTGTACTCGACGGACACCCAAACTCAAATGTAA 1284 0.4634 MASMPLGQQQQLQPPQVATPPQQPPQTENDSMKVDSRGGSDAASNKEMSAPVAEGNEAHALTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRMMDHPNVISLRHCFFSTTSRDELFLNLVMEYVPETIFRVIKHYSSINQRIPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSVDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPHIKAHPWHKVFHKRMPPEAIDLASRLLQYSPKLRYTAVEALAHPFFDELREPNARLPNGRLLPPLFNFKQELDGAPPELLPKLIPEHVRRQIGFGLLYSTDTQTQM 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01097 427 FunFam Glycogen synthase kinase-3 beta 67 162 - -
Phco10g01097 427 FunFam Shaggy-related protein kinase kappa 163 410 - -
Phco10g01097 427 MobiDBLite consensus disorder prediction 1 16 - -
Phco10g01097 427 SUPERFAMILY Protein kinase-like (PK-like) 82 390 IPR011009 -
Phco10g01097 427 Gene3D Phosphorylase Kinase; domain 1 68 162 - -
Phco10g01097 427 CDD STKc_GSK3 78 370 IPR039192 -
Phco10g01097 427 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 45 412 - -
Phco10g01097 427 Pfam Protein kinase domain 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01097 427 ProSitePatterns Protein kinases ATP-binding region signature. 89 113 IPR017441 GO:0005524
Phco10g01097 427 Gene3D Transferase(Phosphotransferase) domain 1 163 410 - -
Phco10g01097 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Phco10g01097 427 ProSiteProfiles Protein kinase domain profile. 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01097 427 SMART serkin_6 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g01097 427 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01097 Phco-Chr10 32596754 32601383 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Phco10g01097 Pkinase 2.2e-64 CL0016