Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01013 ATGGACTCACAACAGCTTTTCAGTTTTGGTGTTGCTAGTGCAGGATTACCTTACATGTCATCTTTTCCCACTGTTCCATCCCTACCCAACAGGCTGCTTGGATCCTTGAAATATGACACTGGAAACTCACCTAATTCACCCTTTTCTACTTATTTTGATTCTGACACCCTTTCTGCATTGAGTGATAGCCTGGAGCAATACAGCCCCAGAGAAAACATCTCTGGTGTCAGCACTTCTTGTATCACTTCAGTGGAAACCAACCCTTATATGTATGGATCAATCTCATCTGTGGACTTTATAGAGAATTTCCCACTATATTCTGCTAGGAACTCTCTTCCACAGAATGTGAATTGTAATCAGAAAATCCAACACGCTTTGCTGGAGCTAGAAACTGCTCTGATGGCCCCTGATGATGAAGTTACCACACCAAATCCATTGTCTGAAAGCAGCAGACCAATGGCATCTGGCCAGAGAAACAGATCTTGGAGGCATGAGAACCATGGATCACAATATGCTCAGCCATCGTATGTTCCCAGCAGTAGGTTGTCAAGTGAAGTTGTGCATGTAGAGAAACGGCAAAAGTTGACGGAGGAACCATCACTGCAAGCTTTCCCACCAAACAATTTGAAGCAATTGCTGATTGCATGTGCCAAAGCCCTACATGAAAACAACGTGAAAGATTTTGATGAATTGGTAGGAAAGGCTAGAGATGCTGTGTCCATCAATGGGGAGCCAATCCAGCGGCTTGGCGCTTACATGGTAGAAGGGCTTGTTGCAAGGAAGCAAGCATCAGGGAAGAGCATCTATCATGCCCTTAGGTGTAGAGAGCCTGAAGGTGAAGAATTACTCTCTTACATGCAACTGCTGTTTGAGATTTGCCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCGGAAGCCTGCAGAAACGAGGATCGCATACACATCATAGACTTCCAAATTGCTCAGGGATCTCAATGGATGACTCTTCTTCAAGCCCTTGCAGCAAGACCTGGTGGTGCTCCCCATGTTCGGATCACGGGGATTGATGATCCTGTTTCTAAATATGCACGTGGCAACGGATTAGAGATTGTTGGGAAAAGGTTGGCCTTGATGTCTGAGAAATTTGGCATCCATGTTGAGTTTCATGGAGTGCCTGTTTTTGCTCCAGAAGTTACAAGGGAAATGCTAGATATCAGGCCTGGAGAGGCCTTGGCTGTGAACTTCCCCTTGCAGCTCCATCACACAGCTGATGAGAGTGTTCATGTGAGTAACCCAAGGGATGGACTATTGAGATTGGTAAAGTCACTTTCTCCCAAGGTGACCACACTGGTGGAGCAGGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTATTGAAACCTTGGATTACTACTTGGCAATCTTCGAGTCTATTGATGCCAGCCTCCTCCCAAGAGATAGCAAGGAGCGGATCAATGTGGAGCAACATTGTCTGGCCAGGGATATAGTGAATATTATTGCTTGTGAAGGCAAGGAAAGGGTTGAGAGACATGAATTATTGGGCAAGTGGAAATCCAGGTTAACAATGGCTGGCTTCAGTCAGTGTCCTTTGAGCTCTTATGTGAATTCTGTCATAGGAATCCTTCTGAAGTGCTATTCAGAACATTATACTCTATTGGAGAAGGATGGAGCCATGTTGTTGGGGTGGAAGGACCGAAATTTGATATCAGCTTCAGCCTGGCATTGCTGA 1746 0.4525 MDSQQLFSFGVASAGLPYMSSFPTVPSLPNRLLGSLKYDTGNSPNSPFSTYFDSDTLSALSDSLEQYSPRENISGVSTSCITSVETNPYMYGSISSVDFIENFPLYSARNSLPQNVNCNQKIQHALLELETALMAPDDEVTTPNPLSESSRPMASGQRNRSWRHENHGSQYAQPSYVPSSRLSSEVVHVEKRQKLTEEPSLQAFPPNNLKQLLIACAKALHENNVKDFDELVGKARDAVSINGEPIQRLGAYMVEGLVARKQASGKSIYHALRCREPEGEELLSYMQLLFEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGSQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGNGLEIVGKRLALMSEKFGIHVEFHGVPVFAPEVTREMLDIRPGEALAVNFPLQLHHTADESVHVSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDASLLPRDSKERINVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFSQCPLSSYVNSVIGILLKCYSEHYTLLEKDGAMLLGWKDRNLISASAWHC 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01013 581 MobiDBLite consensus disorder prediction 137 183 - -
Phco10g01013 581 ProSiteProfiles GRAS family profile. 200 580 IPR005202 -
Phco10g01013 581 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 166 576 IPR005202 -
Phco10g01013 581 MobiDBLite consensus disorder prediction 166 182 - -
Phco10g01013 581 MobiDBLite consensus disorder prediction 142 157 - -
Phco10g01013 581 Pfam GRAS domain family 209 579 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01013 Phco-Chr10 30600451 30602196 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco10g01013 GRAS 2.4e-125 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01013 10 30600451 30602196 Phco10g01013 10 30600451 30602196 ECH
Phco10g01013 10 30600451 30602196 Phco9g01626 9 38186736 38188433 PCT