Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00981 ATGGAAAGCTTAAAGGCTTTGGTTTTGTGGTTTCTTCTGTTGCATTTCATACCAGGCTTCAGCACCCTTGAAACCATTGCTCCAGGCCAATCATTGAAGGATAATGAGACTCTAGTTTCAGAAGAAGGGACTTTTGAAGCAGGGTTCTTCAACTTTGGAGATCAAAGTAGCAAATACTTTGGTATATGGTACAAGGATATTTCTCCAAGAACAGTTGTATGGATAGCCAATAGAGATACTCCAGTTGGAAACTCCTCAGGAGTTTTGAATGTAACTGATGGGGGAAATCTTATTATTTTGAATGGTTCAGGGGCCATAGTCTGGTCTTCCAATACATCAGCAGCTGCAAAGAAGCCTATTGTGCAGCTTTTGGAGACTGGAAACCTTGTTGTGAAAGAAGAAAGCAACCAAGAGAATCTTCTATGGCAGAGTTTTGATCTTCCTAGGGACACTTTGTTGCCAGGGATGCGACTTCGAAGTAGCATGGTAAATAGTAGTTTTACATCTCTGACATCTTGGAGAGACACAGAAGATCCTGGTAGAGGTGTGTATTCATATCACATAGACACTCGTGGTTTTCCTCAAGTGGTGATTACCAAGGGAGGGATATTGTTATATAGACCAGGTTCATGGAATGGCAATATTTTATCTGGGATCCCTTCTGAAACGTTGTACAAAAACTTTAATTTCTCTTTTGTTATAACTGAGAAGGAAGTTTCTTATGGATATGAACTACTGAACAAATCAATTGTTTCTAGATACATGATCACGTTAACAGGTCAAATACAACGTTTCGTTTTGTCTGATTTGACAAATAGTTGGCAGCTTTTCTACTCTGGCCCCGGAGACCAGTGTGACAATTATGCCGTTTGTGGTGTGAATTCTAATTGTGATGTAAATAGATCTCCAACATGTGAGTGCCTTCAGGGTTTCATTCCCAGATCTCAAGAAAAATGGAATGCACAAAACTGGTCTGATGGGTGTGTTGGGAGAGTTAATTTAGATTGTGGCAATAGTGATGATGGCTTTCTGAAGTACCAGGGAATGAAGTTGCCGGATACATCAACCTCATGGTTTGACAGAAGCATGAACCTCGAGGAATGTAGGAATTTCTGCCTGAAAAACTGCTCCTGCACAGCATTTGCAAATTTAGATATCAGAGATGGTGGAAGTGGATGCTTGCTTTGGTTTAATAACATTGTGGATGTGAGAAAACTAACCTCTGGAGGGCAAGATCTTTTCATAAGAGTGGCAGCTTCAGATCTAGGTCATAAAAAAGGCTTAAACAAGAAGCAGCTTGCAGGAATTCTTGTAGGTTGTACTGTATTTATTGTTGTCATGATATTATTGGGAGTGACACTTCGTAGGAAAAAGCATGAGAAGCCAGGTAGCCGGAAGAATCACACTGATAAGACACAGAAGGAAGACATTGACATTCCAATATTTGATTTTTCAACCATAGCTAATGCAACCAATGACTTTTGCGTTACTCATAAATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTACTTTGGCAAATGGCCAAGATATAGCTGTGAAGCGGCTTTGCAATAATTCAGGACAAGGACCAAAGGAGTTCATAAACGAAGTTGTGCTAATTGCTAATCTTCAGCACCGAAACCTTGTGAAGCTTCTCGGGTGTTGCATTCAAGATGATGAGAGGATCTTGATATATGAATTCATGACTAACAGAAGCTTGAACTACTTTATTTTTGATGAAGCTAGAAAAAGTTTGCTGGATTGGGCTCAGCGCTTCCAAATTATTTGTGGGATTGCCCGAGGACTTCTCTATCTTCATGAAGATTCTAGATTAAGAATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTAGATGAAAACATGAATCCAAAAATATCAGACTTTGGTCTCGCTACAACATTTGGAGGAGATGAAGTTGAAGGCAAAACAAAGAGAATAGTGGGAACTTATGGTTATATTTCTCCAGAATATGCAGCCCGTGGGAATTTCTCAGTGAAATCTGATGTCTTCAGTTTTGGTGTTATACTACTAGAGATAATTTGTGGAAAAAAAAATAGGGAATATTTTGACCATCTTGATCATGACCTTCTTGGACATGCATGGAGACTTTGGTGTGAAGAAAAACCAATGGATTTGATAGATGAATCACTAGGCGAATCAATAGCTCTTGCTGAAGCTAATCTATTGAGATGTATTCACATTGGGCTTCTATGTGTACAAGACAGAGCAGAGGATAGACCAGAAATGTCACTAATAGTTCTAATGCTGAATGGTGAGAAACCACTGCCTAGGCCAAGGGAACCTGCTTTTTATCCTCATCAATCTGGCTCTTCATCAGGAAATAGTAAACTGCAATCAACCAATGGGATTTCCATCTCATTGTTGGAGGCAAGATAG 2427 0.3968 MESLKALVLWFLLLHFIPGFSTLETIAPGQSLKDNETLVSEEGTFEAGFFNFGDQSSKYFGIWYKDISPRTVVWIANRDTPVGNSSGVLNVTDGGNLIILNGSGAIVWSSNTSAAAKKPIVQLLETGNLVVKEESNQENLLWQSFDLPRDTLLPGMRLRSSMVNSSFTSLTSWRDTEDPGRGVYSYHIDTRGFPQVVITKGGILLYRPGSWNGNILSGIPSETLYKNFNFSFVITEKEVSYGYELLNKSIVSRYMITLTGQIQRFVLSDLTNSWQLFYSGPGDQCDNYAVCGVNSNCDVNRSPTCECLQGFIPRSQEKWNAQNWSDGCVGRVNLDCGNSDDGFLKYQGMKLPDTSTSWFDRSMNLEECRNFCLKNCSCTAFANLDIRDGGSGCLLWFNNIVDVRKLTSGGQDLFIRVAASDLGHKKGLNKKQLAGILVGCTVFIVVMILLGVTLRRKKHEKPGSRKNHTDKTQKEDIDIPIFDFSTIANATNDFCVTHKLGEGGFGPVYKGTLANGQDIAVKRLCNNSGQGPKEFINEVVLIANLQHRNLVKLLGCCIQDDERILIYEFMTNRSLNYFIFDEARKSLLDWAQRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLATTFGGDEVEGKTKRIVGTYGYISPEYAARGNFSVKSDVFSFGVILLEIICGKKNREYFDHLDHDLLGHAWRLWCEEKPMDLIDESLGESIALAEANLLRCIHIGLLCVQDRAEDRPEMSLIVLMLNGEKPLPRPREPAFYPHQSGSSSGNSKLQSTNGISISLLEAR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00981 808 Gene3D Transferase(Phosphotransferase) domain 1 570 772 - -
Phco10g00981 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Phco10g00981 808 ProSiteProfiles Protein kinase domain profile. 494 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00981 808 MobiDBLite consensus disorder prediction 775 795 - -
Phco10g00981 808 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Phco10g00981 808 Pfam Protein tyrosine and serine/threonine kinase 497 711 IPR001245 GO:0004672|GO:0006468
Phco10g00981 808 Gene3D Hepatocyte Growth Factor 336 415 - -
Phco10g00981 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 570 773 - -
Phco10g00981 808 Pfam PAN-like domain 336 403 IPR003609 -
Phco10g00981 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 212 IPR036426 -
Phco10g00981 808 PIRSF SRK 1 808 IPR024171 GO:0004674
Phco10g00981 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Phco10g00981 808 SMART serkin_6 494 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00981 808 CDD PAN_AP_plant 332 418 - -
Phco10g00981 808 SUPERFAMILY Protein kinase-like (PK-like) 477 766 IPR011009 -
Phco10g00981 808 CDD B_lectin 30 148 IPR001480 -
Phco10g00981 808 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Phco10g00981 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 457 569 - -
Phco10g00981 808 Pfam D-mannose binding lectin 71 174 IPR001480 -
Phco10g00981 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 417 - -
Phco10g00981 808 CDD STKc_IRAK 500 768 - -
Phco10g00981 808 Gene3D - 21 145 IPR036426 -
Phco10g00981 808 SMART ntp_6 338 417 IPR003609 -
Phco10g00981 808 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 756 - -
Phco10g00981 808 Gene3D Phosphorylase Kinase; domain 1 467 569 - -
Phco10g00981 808 SMART blect_4 29 148 IPR001480 -
Phco10g00981 808 Pfam S-locus glycoprotein domain 206 314 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00981 Phco-Chr10 29673429 29676850 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco10g00981 PK_Tyr_Ser-Thr 7e-45 CL0016