Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00976 ATGAATGCAAAGAGGCAATCCCAGGATGTGCCCCAACATATTACATCACTACACAGAAAGACTAAGTGGTTCAGTGAAAGCACAGAGCTTCGAGAGTGTCAAGCGATGAAAATCCTTCTTCTCGTGTTCGTTCTTACTAAGATTCTGTTTTTCTTCTTCCGCACCTCCACTGCAAATGACTCTATATCCCAATTTCAATCACTTTCTGTAGGCAACACCTTGGTTTCTGAGGAGGGTACTTTCGAATTGGGTTTCTTCAGTCCAGGAAGTGCTGCAGATCTTTACTTGGGGATATGGTACAAATCAATACCAGTGAAGACTGTTGTGTGGGTTGCCAACAGAGCCAAGCCAGTAAAAGGAAACTCTAGCATGTTGCATATTAACAGTGAGGGGAATCTTGAGCTTGTTAACCATAATGGGGTTGTGGCTTGGTCAGCAAACTCTTCAAAGAAGGTTCAAAATCCCATTGTTCAGCTCTTAAATTCTGGGAATTTGGTAGTGAGAGATGAAGGAGACCAAGTACCTGAACGCTACTTGTGGCAAAGCTTTGATTACCCTTCTGACACTCTTTTACCAGGAATGAAGCTGGGTTGGGACTTAAGAACCGGCCTCGAGCGGCGTGTATCTTCTTGGAAGAATTGGGATGATCCATCACCAGGTGATTTCAGTTGGGGTATCTCTCTCGAAGGATTTCCTCAAGTGATGATGTGGAAGGGGTCAAAGGAGTTTTACCGTGGTGGCCATTGGAATGGACTTGGATTCAGTGGTGCCCCAGAATTGAAGGCAAATCCAGTTTTTAACTTCAAGTTTGTTTCCAACGAGAATGAGGTGTACTACACCTACAGCCTCAGGAATGAGTCTATGATTTCAAGGATTGTAATGAACCAATCCATTTCTACTCGCCAAAGGTACATATGGATTGAAGATGCTCAAGCTTGGAGGCTTTATGCATCTGTACCTAGAGATAACTGTGATTCCTACAATATCTGTGGACCAAATGGGAATTGTGTAATTGGTGATTCTCCAGTTTGCCAGTGTTTAAGTGGATTTAAACCAAGATTGCCAGGGCACTGGGACATGATGGACTGGACTCAAGGATGTTTTCTTACTGAAGAATGGAGATGTGAGGAAAGGAGGAAACATGGGTTTGTTAAATTTAGTCAGCTGAAAGCTCCAGATACTTCAAATTCTTGGGTCAATGAAAGTATGAGTCTCACTGAGTGCAGGGATAAGTGCTTGGAGAATTGTTCCTGTAAAGCTTATGCAAATACAGATGTTGGAGGAGGAGGTAGTGGTTGTTTGATGTGGTTTGGTGATCTCAGGGATATCAGAGAGTTTTCTGGTGGTGGTAGCGATTTATATATCAGAACTAAATTTTCAGAATCAGCTGTGAAAGAAAAACATACCATGAAGGTGGTGGCAATAATCCTCATAATAGCCTCCGTTCTTACAACCATTCTGGTTTTGTACAATGTTGGAAAGAGAATGAAAAAGTTCAGAGCTTGTGAATCAAGTAACTCCTTGATAGTAGAGAATAAAGACGAGGAAGAGCTTGAGCTTCCTTTCTTTGACCAAGCTGCAATCGCCAAAGCAACTAATGGCTTCTCAATTACCAATAAGCTTGGAGAAGGTGGATTTGGAGCCGTATATATGGGTACCTTAGCAGATGGACAAGAAATTGCTGTGAAAAGACTCTCACAAAGTTCTGGACAAGGGTTTAATGAATTTAAGAACGAAGTCATATTGATAGCCAAACTTCAGCATCGGAACCTAGTTAAGCTTATTGGTTATTGCATTGAAGGAGAGGAGAAGATGCTTATCTATGAATACATGCCCAACAAAAGCCTAGACTCCTTTATATTTGATCAGGCAAAGGCTAAAATTTTAGATTGGTCTACACGCTTCAGTATTATTTGTGGAGTTGCACGAGGACTTCTGTATCTTCATCAAGATTCTAGATTGAGAATAATACATAGAGACCTTAAAGCAAGTAATGTCCTACTTGATCATGAGTTCAACCCAAAAATATCTGATTTTGGCATGGCTAGAACTTTTGGGGGAGATCAGATGGAAGGAAATACAAAAAGGGTGGTTGGAACATATGGCTACATGGCACCTGAATATGCCATTTATGGACTATTCTCAGTGAAATCTGATGTCTTCAGCTTTGGTGTACTAATGCTAGAGATAGTAAGTGGAAAGAAGAACAGAGGTTTTTCCCATTCAAATAACAGTATTAACCTTATTGGACAAGCATGGAGATTTTGGAAAGAAACCAGACCTTTGGACTTAATTGATTCATGTATGGAGAATTCATCTGTTCTATCAGAAGCATTGCGTTGTATCCACATCAGTCTTCTATGTGTCCAACAGCATCCTGAGGATAGGCCAAGTATGTCCACTGTGGTAGTGATGCTGAGCAGTGAGAGTGCCCTGCCTCAACCTAAGGAGCCTGGTTTCCTTATGGAGAAGGAGAAATATTTTCTTGAAGCAGATTCCTCCACCAACCACCTCTTTTCTTCTACCAATGATATAAGTCTTACCATGTTTGAGCCTCGGTAG 2562 0.4137 MNAKRQSQDVPQHITSLHRKTKWFSESTELRECQAMKILLLVFVLTKILFFFFRTSTANDSISQFQSLSVGNTLVSEEGTFELGFFSPGSAADLYLGIWYKSIPVKTVVWVANRAKPVKGNSSMLHINSEGNLELVNHNGVVAWSANSSKKVQNPIVQLLNSGNLVVRDEGDQVPERYLWQSFDYPSDTLLPGMKLGWDLRTGLERRVSSWKNWDDPSPGDFSWGISLEGFPQVMMWKGSKEFYRGGHWNGLGFSGAPELKANPVFNFKFVSNENEVYYTYSLRNESMISRIVMNQSISTRQRYIWIEDAQAWRLYASVPRDNCDSYNICGPNGNCVIGDSPVCQCLSGFKPRLPGHWDMMDWTQGCFLTEEWRCEERRKHGFVKFSQLKAPDTSNSWVNESMSLTECRDKCLENCSCKAYANTDVGGGGSGCLMWFGDLRDIREFSGGGSDLYIRTKFSESAVKEKHTMKVVAIILIIASVLTTILVLYNVGKRMKKFRACESSNSLIVENKDEEELELPFFDQAAIAKATNGFSITNKLGEGGFGAVYMGTLADGQEIAVKRLSQSSGQGFNEFKNEVILIAKLQHRNLVKLIGYCIEGEEKMLIYEYMPNKSLDSFIFDQAKAKILDWSTRFSIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDHEFNPKISDFGMARTFGGDQMEGNTKRVVGTYGYMAPEYAIYGLFSVKSDVFSFGVLMLEIVSGKKNRGFSHSNNSINLIGQAWRFWKETRPLDLIDSCMENSSVLSEALRCIHISLLCVQQHPEDRPSMSTVVVMLSSESALPQPKEPGFLMEKEKYFLEADSSTNHLFSSTNDISLTMFEPR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00976 853 Gene3D Phosphorylase Kinase; domain 1 509 610 - -
Phco10g00976 853 SMART ntp_6 378 457 IPR003609 -
Phco10g00976 853 SMART blect_4 65 186 IPR001480 -
Phco10g00976 853 Pfam Protein tyrosine and serine/threonine kinase 537 805 IPR001245 GO:0004672|GO:0006468
Phco10g00976 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 55 183 - -
Phco10g00976 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Phco10g00976 853 ProSiteProfiles Bulb-type lectin domain profile. 59 180 IPR001480 -
Phco10g00976 853 SUPERFAMILY alpha-D-mannose-specific plant lectins 108 217 IPR036426 -
Phco10g00976 853 PIRSF SRK 31 853 IPR024171 GO:0004674
Phco10g00976 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 611 814 - -
Phco10g00976 853 CDD PAN_AP_plant 375 457 - -
Phco10g00976 853 Pfam D-mannose binding lectin 107 212 IPR001480 -
Phco10g00976 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 500 610 - -
Phco10g00976 853 Pfam S-locus glycoprotein domain 244 353 IPR000858 GO:0048544
Phco10g00976 853 CDD B_lectin 66 186 IPR001480 -
Phco10g00976 853 SUPERFAMILY Protein kinase-like (PK-like) 520 806 IPR011009 -
Phco10g00976 853 CDD STKc_IRAK 541 806 - -
Phco10g00976 853 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 45 797 - -
Phco10g00976 853 ProSitePatterns Protein kinases ATP-binding region signature. 541 563 IPR017441 GO:0005524
Phco10g00976 853 Gene3D Transferase(Phosphotransferase) domain 1 611 817 - -
Phco10g00976 853 SMART serkin_6 535 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00976 853 ProSiteProfiles Protein kinase domain profile. 535 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00976 853 Pfam PAN-like domain 375 443 IPR003609 -
Phco10g00976 853 ProSiteProfiles PAN/Apple domain profile. 375 458 IPR003609 -
Phco10g00976 853 ProSiteProfiles EGF-like domain profile. 320 356 IPR000742 -
Phco10g00976 853 Gene3D - 54 183 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00976 Phco-Chr10 29609819 29614236 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco10g00976 PK_Tyr_Ser-Thr 4.7e-49 CL0016