Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00954 ATGGTGATGATGAAACTTGTAAAGTGGGTTTCCTTTGTTTTTGTTGTTTATTTGTTTTTGGTGAATGGTTCATTTGCTACATTCACTCCTCGTGATAATTATCTAATTACTTGTGGTTCCTCCCAAAGTATCACTTTCCAAGATCGGACTTTCGTTCCTGATTCACAGCATTCTTCTCCGGAGTTGAAAACCTCGAATTCTGTTGTTGCTAGTTCAAATTCTAGTGTCCCTTTCCCAATATATCAATCAGCTAGGATTTTCACTGAGAAAGCTTCTTATAGGTTTAAGGTTGATGAAGGTAGGCACTGGCTGAGGCTATATTTTTCCCCTCTAACCAACTCAGCCCATAATTTGACTGCTGCTGTTATAACAGTGGTCACTGATGATTTTGTTCTATTATGCAACTTCTCCTTTAGGAACTACAATGGTTCATATATGTTTAGGGAGTATGCCATCAATGTTACTTCTGATATCTTAACTGTCACCTTCATTCCTTCAAATGGTTCAGCAGTAGCTTTCGTCAATGCAATTGAAGTTGTTTCAATGCCAAATGACTTGTTTGTTGATCAGGCATTGGCCCTTAACCCAACTGCACCATTCAATGGCCTTTCTGAACTTGCTTTTGAGACTGTTTATCGCTTAAACGTAGGAGGTCCCTTGCTCACTCCCCAGAATGATACCCTGGGAAGGACATGGGAGAATGATCAGAAATACCTCCATGTCAATAGTTCAGTCACTAATGTGTCTGTTAACCCTTCCAGCATTAAGTATCATCCAGGTGTTACACCTGAGACGGCACCCAATTGGGTCTATGCCACTTCTGAAGCAATGGGGGATGCAAATGTAGCCAATTCAAATTTCAACATTACTTGGGTCTTCACAGTGGATCCAAACTTCTCCTATTTTATCCGGGTGCATTTTTGTGATATTTTTAGCAAGTCTCTGAACACTTTAGTGTTCAATTTGTTCATAAACACTGACATAGCTCTTGGAAGCCTTGACCTCTCATCCATTACAAATGATTTGTCTGTGCCTTACTATAAGGACTTTATTTCCAATGCCTCAGCAGACTCCAACATTTTGACAGTAAGTGTTGGTCCTGATACAATGGCAGATATCACAAATGCCACTATGAATGGACTGGAGGTTATAAAGATCAGCAATGCATTCAAGAGCTTGGATGGTCTTTCTTCAGTTGAGAGTCTCCTTCCTAATTCACCATCAAGTAAAAGCAAGATGGGAATAATAGTAGGTTCTTCTATTGGGGTTGTGGCTGCTATAGCTTTGGTTGGTTTGTGTTATTGCTGCTTGGTGAGATACAAATCAAAGTCTACTCAACAGGGTCATTCTTGGCTGCCTTTACCCTTATATGGAAACTCTCAGACCATGACAAAAATGTCAACAACTTCTCAGAAGAGTGCAACTGCAAGCTGCATTTCTTTAGCATCATCAAATCTCGGACGGTTCTTCACTTTCCAAGAGATCCTAGATGCAACCAACAAATTTGATGAGACGCTGCTTCTTGGTGTTGGTGGCTTTGGCAGGGTTTATAAGGGAACACTTGAAGATGGGATCAATATCGCTGTTAAAAGGGGGAACCCCAGATCCGAACAAGGTCTTGCCGAATTCCGAACAGAAATTGAGATGTTATCCAAGCTTCGCCATCGCCATCTTGTGTCCCTCATTGGCTATTGTGATGAGAGATCTGAAATGGTTCTTGTCTATGAATACATGGCTAATGGACCTCTCAGGAGTCATTTATATGGAACTGACTTACAACCTCTATCATGGAAGCAACGGCTTGAAATTTGCATTGGAGCAGCAAGAGGTCTTCATTATCTTCACACTGGAGCATCTCAAAGCATAATTCATCGCGATGTAAAGACAACCAACATCCTCTTAGATGATAACTTTGTTGCGAAGGTTGCTGACTTTGGCCTCTCAAAAACTGGTCCTGCTCTTGACCAGACTCATGTGAGCACTGCTGTTAAAGGTAGTTTCGGTTATCTTGATCCTGAATACTTCAGAAGACAACAGCTTACAGAGAAATCAGATGTATATTCATTTGGAGTAGTTTTGATGGAAGTGTTATGCACAAGACCAGCCTTGAACCCTGTCCTTCCTAGGGATCAGGTGAACATAGCTGAGTGGGCAATGAGCTGGCAGAAGAAAGGAATGCTTGATCAAATCATGGATCAGAATCTAGTGGGGAAAGTAAACCCTGCTTCTCTGAAGAAGTTTGGGGAAACAGCCGAGAAATGCTTGGCCGAGTATGGAGTGGATAGGCCTTCTATGGGTGATGTCTTGTGGAATCTTGAATATGCTTTGCAGCTTCAAGAGACCTCATCAGCACTCATGGAGCCTGAAGATAACAGCACAAACCACATTACTGGAATTCAGTTGACTCGTCTTGAGCCTTTTGACAACAGTGTTAGTATGATTGATGGGGTCAACTCTTTCACAGATGATGATGCAGAAGATGCTGCCACAAGTGCTGTGTTCTCACAATTGGTAAATCCTCGAGGAAGATGA 2532 0.4171 MVMMKLVKWVSFVFVVYLFLVNGSFATFTPRDNYLITCGSSQSITFQDRTFVPDSQHSSPELKTSNSVVASSNSSVPFPIYQSARIFTEKASYRFKVDEGRHWLRLYFSPLTNSAHNLTAAVITVVTDDFVLLCNFSFRNYNGSYMFREYAINVTSDILTVTFIPSNGSAVAFVNAIEVVSMPNDLFVDQALALNPTAPFNGLSELAFETVYRLNVGGPLLTPQNDTLGRTWENDQKYLHVNSSVTNVSVNPSSIKYHPGVTPETAPNWVYATSEAMGDANVANSNFNITWVFTVDPNFSYFIRVHFCDIFSKSLNTLVFNLFINTDIALGSLDLSSITNDLSVPYYKDFISNASADSNILTVSVGPDTMADITNATMNGLEVIKISNAFKSLDGLSSVESLLPNSPSSKSKMGIIVGSSIGVVAAIALVGLCYCCLVRYKSKSTQQGHSWLPLPLYGNSQTMTKMSTTSQKSATASCISLASSNLGRFFTFQEILDATNKFDETLLLGVGGFGRVYKGTLEDGINIAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMVLVYEYMANGPLRSHLYGTDLQPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPRDQVNIAEWAMSWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTRLEPFDNSVSMIDGVNSFTDDDAEDAATSAVFSQLVNPRGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00954 843 Gene3D Phosphorylase Kinase; domain 1 460 577 - -
Phco10g00954 843 FunFam Receptor-like protein kinase FERONIA 207 388 - -
Phco10g00954 843 FunFam Receptor-like protein kinase FERONIA 578 794 - -
Phco10g00954 843 SUPERFAMILY Protein kinase-like (PK-like) 480 773 IPR011009 -
Phco10g00954 843 FunFam receptor-like protein kinase FERONIA 463 577 - -
Phco10g00954 843 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00954 843 Gene3D - 206 388 - -
Phco10g00954 843 Gene3D - 33 183 - -
Phco10g00954 843 FunFam Putative receptor-like protein kinase 33 183 - -
Phco10g00954 843 Gene3D Transferase(Phosphotransferase) domain 1 578 797 - -
Phco10g00954 843 CDD STKc_IRAK 508 773 - -
Phco10g00954 843 PANTHER OS07G0166700 PROTEIN 488 779 IPR045272 GO:0004714|GO:0006468
Phco10g00954 843 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00954 843 Pfam Protein tyrosine and serine/threonine kinase 508 768 IPR001245 GO:0004672|GO:0006468
Phco10g00954 843 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Phco10g00954 843 Pfam Malectin-like domain 36 385 IPR024788 -
Phco10g00954 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00954 Phco-Chr10 28292248 28294779 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco10g00954 Malectin_like 5.6e-34 CL0202