Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00938 ATGGGAGTTCCAGAGAAAGACCCTCTTGCCCAGCTGAGTCTACCTCCTGGTTTTCGATTCTACCCCACCGACGAGGAGCTTCTCGTTCAGTATCTCTGCCGCAAGGTCGCCGGCCACCATTTCTCTCTCCCAATCATTGCTGAAATTGATTTGTACAAGTTCGACCCATGGGTTCTTCCAAGCAAGGCGATTTTTGGGGAGAAAGAGTGGTACTTTTTCAGCCCTCGAGACAGGAAGTACCCAAACGGGTCTCGACCCAACAGAGTAGCCGGGTCGGGTTATTGGAAAGCCACCGGAACCGACAAGATCATCACCACCGAAGGTAGAAAAGTGGGCATAAAAAAAGCCCTGGTTTTTTACGTTGGCAAAGCACCCAAAGGCACCAAAACCAATTGGATCATGCACGAGTATCGCCTTCTTGATTCTTCCCGAAAGACCACTGGTACCAAGCTGGATGATTGGGTTCTGTGTCGTATATACAAGAAGAACTCGAGTGCACAGAAGGCGGTGCAAAACGGCGTCGTTTCGAGCAGGGAACACACTCAATACAGCAACGGTTCCTCGTCATCGTCGTCGTCCCACCTTGACGACGTTCTGGAATCGTTCGACGAACGGTGTTTCATGATGCCACGTGTGAGCGCGGTGCAGCAACAACATGAGGAGAAGGTGAACATTCAGAACCTGGGTGCGGGTGGGTTGGTGGATTGGGCGAACCCTGCGGTTCTGAATCCGGTGGGTGATTTCGTTTCGGGGAATAATCAAGTGGTGCAGAACCATACTCAGGGGATGGTGAACTACAGCGGGTGCAATGACCTTTATGTTCCGACCTTCTGCCACGTGGACTCTGCGCTTCCGCAAAAGGTGGAGGAAGAGGTGCAAAGTGGCGTGAGAAACCAAAACAGTAATAACTCGTGGTTTCTTCAGAACGATTTTACGCAGGGGTTTCAGACCTCGGTGGACACGTGTGGGTTTAAGTTCCCGGTTCAGCCGGTGGGGTTCGGGTTCAGGCATTGA 1014 0.5187 MGVPEKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKTTGTKLDDWVLCRIYKKNSSAQKAVQNGVVSSREHTQYSNGSSSSSSSHLDDVLESFDERCFMMPRVSAVQQQHEEKVNIQNLGAGGLVDWANPAVLNPVGDFVSGNNQVVQNHTQGMVNYSGCNDLYVPTFCHVDSALPQKVEEEVQSGVRNQNSNNSWFLQNDFTQGFQTSVDTCGFKFPVQPVGFGFRH 337
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00938 337 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 220 - -
Phco10g00938 337 MobiDBLite consensus disorder prediction 170 195 - -
Phco10g00938 337 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Phco10g00938 337 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Phco10g00938 337 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Phco10g00938 337 FunFam NAC domain-containing protein 72-like 23 167 - -
Phco10g00938 337 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco10g00938 Phco-Chr10 27776146 27777435 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco10g00938 NAM 6.4e-37 No_clan