Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00885 ATGGAGAATCAGCCTTCAAATGGAAGAAAAGCAATGGAAGAAGAGCTCAACAAAGGGCGTTACACAGCAAACCAGTTACTCCAAATACTTGTTCATAAATCCAACACTCGTCATAGAGATGCAGAAGTAGAAGGGTTAGTGTTACCATTTGTTGAAGATCTTGTTCGTAAGGTACTGAGATCGTTCTCAAATACCCTTTTGCTGTTGAACACTCATAGTGATGTTTCCGATGGGGTTGTTATGCCTAACACTATCAATGATGTCTCTTCGTCCCTCAAATGCCCTAATCTTGAGGATAAGGATGGGGTTTGCAAGGGTTCCATCAACGCTAAAAGACGAAGAGTGTGTCGCAAGAGAAATGCACCAACATGGGAGAAGAACAGCTCCCATCTGATGGAAGATGGCTATATATGGAGAAAGTATGGACAGAAAATGACCATGAATGCAAAATACCTCAGGAGCTACTACAGATGCACTCACAAGTATGATCAGGGTTGTCCAGCAACCAAACAGGTTCAAAGGATCCAAGAGGACCCTCCATTGTACCGAACAACTTATTATGGTCATCACAATTGCAAAATCTCTTTGGGTCAAGAAATAATTTTGGAACCAGCTTTTTCTTCTGACTCTTCAATGTTCCTTAGCTTCAGTACCACCTTCCCAACCAAAGAAGAATACCAATTTTCGTCATCACTTTTTTCATCCACAAAACAGGAGCCTATGGAAGTGACTCCGGATGACTGTGGTATGCACAACCAACTACCCTCATCAGATTACCATCTGTTAACTGACTATGAACTTGATTTCAATTGTTTGAGGCATGAAAATATGCAGTCTATGCTATCCTTCACTGAATCTGTTCAATTTGATAAAGTTTATGGGAGTGGTATGGATTTTGATGGCTAG 906 0.4095 MENQPSNGRKAMEEELNKGRYTANQLLQILVHKSNTRHRDAEVEGLVLPFVEDLVRKVLRSFSNTLLLLNTHSDVSDGVVMPNTINDVSSSLKCPNLEDKDGVCKGSINAKRRRVCRKRNAPTWEKNSSHLMEDGYIWRKYGQKMTMNAKYLRSYYRCTHKYDQGCPATKQVQRIQEDPPLYRTTYYGHHNCKISLGQEIILEPAFSSDSSMFLSFSTTFPTKEEYQFSSSLFSSTKQEPMEVTPDDCGMHNQLPSSDYHLLTDYELDFNCLRHENMQSMLSFTESVQFDKVYGSGMDFDG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00885 301 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00885 301 Gene3D WRKY domain 119 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco10g00885 301 ProSiteProfiles WRKY domain profile. 127 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00885 301 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00885 301 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 34 218 IPR044810 GO:0003700
Phco10g00885 301 SUPERFAMILY WRKY DNA-binding domain 128 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00885 Phco-Chr10 22399258 22401126 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco10g00885 WRKY 1.3e-23 CL0274