Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00884 ATGGTGTCTGTCTCTCTGCTTGGCGGCCATAATTGGCATAGTGTTATACCAAATAGGAAAATGGAGAATCAGATTCCAAATGGCAAAAGGGCAATGGAAGAAGAGCTGAACAGAGGGCGTGACATGGCAAATCAGTTGCTTCAAGTTCTTGCTCATGATAAATCCATCACTCATCTTGAAAAGGAAGAAGGGTCAAAGTCAGTGTTACCATTTGTTGAAGATCTTGTGCGCAAGGTTCTGTGTTCATTCACAAATACCCTTTTGCTTTTGAACTCCAGCAACGATGTTTCCCATGAGGTGGCGACGTCTATCACTCTCAGAGATGTCTCTTCGTCCACCAGTTCCCCAAAGAAGTTGGAGTCTGTGGATGAAACTTGCAAGAGTCGCAATATTCTCAGCACTGAAAACCTAAGAAGAGGCTACAAGAGAAAATCAATTGCGCCAACTTGGGGGAAGGACAGCTGCATACTGGTTGAAGATGGTTATGTATGGAGAAAATATGGACAAAAAATGACAATGAACGCCAAATACCTAAGGAGCTACTACAGGTGCACTCACAAGAATGATCAGGGATGCCAAGCAATGAAACAAGTGCAGAGAATTCAAGATAATCCTCCTTTGTACCGAACAAACTATTATGGCCATCACACTTGTAAAAGCAATATGAATCCAGAGATTGTTTTGGAACCTCTTTCTCTCTCTGCCTCTTCCACATTACTTAGCTTTAATAACAGCCTTCATAGCAAACAAGAAAACCCGTTTCCCTCATCACTACTTGCTTCAAACAAGCATGAGCACATGGAAGTGATTCACGATGAACATAGTGCTCAGAGTCAATTATCCTCTCTCGAAGACCTCTTATTGTATGATTGTGAAGTTTATTGCGATTATTCAAGGCGTGTGGCTATGCTATCACTCACTGAACCCGTTGAATTTGAGAATGCTTTTATCAGCAGTTTGGATTTTGCTGGCTAG 975 0.4195 MVSVSLLGGHNWHSVIPNRKMENQIPNGKRAMEEELNRGRDMANQLLQVLAHDKSITHLEKEEGSKSVLPFVEDLVRKVLCSFTNTLLLLNSSNDVSHEVATSITLRDVSSSTSSPKKLESVDETCKSRNILSTENLRRGYKRKSIAPTWGKDSCILVEDGYVWRKYGQKMTMNAKYLRSYYRCTHKNDQGCQAMKQVQRIQDNPPLYRTNYYGHHTCKSNMNPEIVLEPLSLSASSTLLSFNNSLHSKQENPFPSSLLASNKHEHMEVIHDEHSAQSQLSSLEDLLLYDCEVYCDYSRRVAMLSLTEPVEFENAFISSLDFAG 324
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00884 324 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 34 249 IPR044810 GO:0003700
Phco10g00884 324 Pfam WRKY DNA -binding domain 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00884 324 SUPERFAMILY WRKY DNA-binding domain 156 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco10g00884 324 Gene3D WRKY domain 150 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco10g00884 324 SMART WRKY_cls 158 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00884 324 ProSiteProfiles WRKY domain profile. 153 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco10g00884 Phco-Chr10 22254167 22256360 Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco10g00884 WRKY 5.5e-22 CL0274