Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00883 ATGGAGAATCAGCTTTCAAAAGAAAGAAGGGCAATGGAAGAAGAACTAGTCAGAGGGCGTGAGATAGCAAACCAGTTACTTGAAGTGTGTGTTCATAGATCCAACACTCATCATCATGAAGATGTACACATGCTTTCCTTCATTGAAGATCTTGTGCGCAAGGTGCTGTGTTCATTCACAAACACCCTTTTGCTTTTGAACACTGATAATGATGTCTCTAATGAGGTTTCTATGCCTATCACCGTCAAAGATATCCCTTCGTTTGCTAAATGTGCAAAACCCCAGTATAGTGATGAGGTTTGCAAGAGTTTCTTCCAAACTGAAAAACGAAGAGGGTGCTACAAGAAAAAATCAAGTGCACCAACATGGGTGACTAATAGCTCAATTCTGATGGAAGATGGCTATGTATGGAGAAAGTATGGACAAAAGATAACAACGAATGCAAAATACTTCAGGAGCTACTATAGATGCACTCACAAACATGACAAGGGTTGTCCAGCAATCAAACAGGTTCAGAGAATTCAAGAAGACCCTCCATTGTACCGGACAACATATTATGGTAATCACAATTGCAAAAGCTCTTCAAGTTCAGATATAATAATGGAATCAGCTTCTCCTTCTGGCTCTTCTGTGTTCCTTAGCTTCAGTAACACCTTGCCAACCAAAGAACAATACCAATTACAGTCATCTTCACTTTCTTCATCCACGAAACAGGAGCCAGTGGAAGTGATTCAGGGTGAACTTATTGATGATCACAGTCCATTAGCCTCATCAGATTACCTCCTGTTATGTGACTATGAACTTGATTTCAATTACATGGGGCATGTTACTACGCTATTTTAG 843 0.3998 MENQLSKERRAMEEELVRGREIANQLLEVCVHRSNTHHHEDVHMLSFIEDLVRKVLCSFTNTLLLLNTDNDVSNEVSMPITVKDIPSFAKCAKPQYSDEVCKSFFQTEKRRGCYKKKSSAPTWVTNSSILMEDGYVWRKYGQKITTNAKYFRSYYRCTHKHDKGCPAIKQVQRIQEDPPLYRTTYYGNHNCKSSSSSDIIMESASPSGSSVFLSFSNTLPTKEQYQLQSSSLSSSTKQEPVEVIQGELIDDHSPLASSDYLLLCDYELDFNYMGHVTTLF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00883 280 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00883 280 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 250 IPR044810 GO:0003700
Phco10g00883 280 SUPERFAMILY WRKY DNA-binding domain 126 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco10g00883 280 Pfam WRKY DNA -binding domain 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco10g00883 280 Gene3D WRKY domain 116 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco10g00883 280 ProSiteProfiles WRKY domain profile. 126 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00883 Phco-Chr10 21999491 22000772 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco10g00883 WRKY 1.7e-23 CL0274