Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00837 ATGAGGGTGAGTTACCCTCGTTTCTTCTTATTCCTTCTGCTCCTTGCTGTCTTTTGCTTTGCCTCCTTTGCTTCTGGAGCCACTCTGCCCCAAGATGAAGTGAAAGCTCTGGAAGATATAGCTAAGATACTTGGGAAGAAGGACTGGGATTTCAGCGTGGATCCATGCAGTAAAGAACGAAATTGGACATCTGCAGTACAAGTAAAAGGGAGTGAAAATGAATTAAGATGCAATTGCACCTATAACAATGGCACCGTTTGTCATGTCACCAACATAATTTTGAAAGCACAAAATCTCCCTGGCACTCTCCCACAAGATCTGTTCAGATTGCCTTACCTACAAGAAATTGACCTTAGTCGCAATTACCTGAACGGTACAATTCCTAAAGAATGGGGCTCCACGAAACTTCTCAACATTTCCCTCCTTGGAAATCGATTAACGGGCTCAATACCAAAAGAGATAGCAAACATATCCACTCTTCAAAGTTTTGTCTTGGAGGCCAATCAACTATCTGGAGATCTTCCTCCTGAGCTTGGGAATCTACCCCAAATTCAAAGACTGCTACTTTCCTCCAACAATTTTACAGGAGAGTTACCTGAAACATTGGCCAAGTTCACTACATTGCAGGATATTCGAATTGGGGACAATCAGTTTTCTGGGAAGATACCTGATTTTATTCAAAGTTGGACAAGTCTCCAAAAACTAGTTATTCAAGGGAGTGGATTAAATGGGCCTATTCCTTCTGGAATTTCACTTCTGAAAAACTTAACTGACTTGAGAATTAGTGATCTGAATGGATCTGAACATTCACCTTTTCCACAACTTAACAACATGACGTTAAAATATCTGATTTTGAGGAATTGCAACATTAATGGAACTCTACCAATATATCTTGGGACAATGACAACCTTGAAAAACTTAGACCTCAGCTTTAACAAATTGACTGGACCAATTCCGAGTAACTATGATGCCCTAAGAAAAGTCGATTACATATATTTAACTGGAAATCTTCTCAATGGACCAGTACCTGCATGGACAGAGAACGCTGATAATGTAGATATTTCATATAACAACTTCAGCACCACAAGCCAAGGGAGTACTACATGTCAAAATGGAAATGTGAACTTGTTTTCTAGCTCCACAACGCACAGTGACTCAGGAACAGTTGCTTGCTTGGGAAGCAATGTCTGTCAAAAAAGCTCATACTCCCTTCATATAAATTGTGGTGGAAAGATGGTAACAGAGGGCAGAAACACATATGATGATGATTTAGATAATGGAGGTCCAGCTAGATTTCACCGAAGTGGAACAAAAAATTGGGCATTTGTCACTACTGGTAACTTCATGGATAATGACGCTGGCGACTACTCTATCTCGCAAAATAAATCATCGCTTTCAATGGACAATGCTGACCTCTACATGGATGCCCGAGTTTCTCCCACTTCTCTAACGTATTATGGATTTTGCTTGGGAAAAGGAAACTACACAGTTCATCTACATTTTGCAGACATCATGTTTATTAATGATCAAACATTTAACAGTTTAGGAAGACGAGTATTTGACATCTATATTCAGGGAGAGCTAGTGCAGAAAGACTTCAATATTGTAGAAGAAGCGGGAGGAATTGATAAAGCAATCATAAAAAACTTCACTGCTGTTGTGAGTAGTAATACCTTGGAGATACGTTTGTATTGGGCTGGAAAAGGGACAACTAGTCTCCCATATAGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTGGAACCTAACTTTACACCACCCTCAGAGAATGGAAGTAGCGTATCTGTAGGAGCTGTGGTTGGAATTGTAGTTGCAGGAGTAATTGTTATCATCCTTGTACTTGTCATTCTTTGGTGGAAAGGATGTCTAGGAAAGAAAAGTTCTTTAGAAAGAGAGCTAAAGGGTTTAGACCTGCGAACTGGTGTGTTTACTTTAAGAGAAATCAAAGTAGCGACAAACAACTTTGATGTTGCAAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGATGTCTATCAGATGGAACACTGATAGCAGTGAAGCAACTTTCTTCTAAATCAAAACAAGGAAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAACATCCTTATCTTGTTAAACTTTATGGATGTTGTGTGGAGGGAGATCAACTATTACTGGTATATGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTATTTGGACCTGAAGAACACCAAATAAGATTGGATTGGCCAACAAGATACAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGATTAAAGGTTGTTCATAGAGACATTAAGACCACTAATGTATTGCTTGATAAAGATCTCAATCCAAAGATATCTGACTTTGGTTTGGCCAAACTGGATGAGGAAGAAAATACACATATTAGCACCCGCATAGCTGGAACATATGGATATATGGCTCCAGAATATGCCATGCATGGTTATTTGACTGATAAAGCAGATGTCTATAGTTTTGGAATTGTTGTCTTGGAAATCATAAATGGAAGGAACAATACCATTCACCGTCCAAAAGAACAATCATTCTCCATTCTTGAATGGGCACATCTGTTGAAAGAGAATGGAGATCTAATGGACCTAGTTGATAGAAGATTGGGTTCAAACTTCAACAAAGAGGAGGTGTTAGTGTTGATAAGAGTGGCTCTCTTATGCACTAATGTTACTACAACAGTTAGGCCAAGCATGTCATCAGTGGTAAGCATGCTAGAAGGAAGAACTGTTGTTGAGGAAGTGTTTTCAGAGGCAAGTGATGTGGAAGAGAAGAAGTTAGAGAAAATGAGACAATACTACCAAGAGTTGAGTATCTCAAGGGATGAGCCATGGACTTCCTCATCTACTTCTGCAGCAGATCTTTATCCTTTAACCCTGGATTCTTCTTACTTGCAGAAGAGAGGCTAG 2994 0.3931 MRVSYPRFFLFLLLLAVFCFASFASGATLPQDEVKALEDIAKILGKKDWDFSVDPCSKERNWTSAVQVKGSENELRCNCTYNNGTVCHVTNIILKAQNLPGTLPQDLFRLPYLQEIDLSRNYLNGTIPKEWGSTKLLNISLLGNRLTGSIPKEIANISTLQSFVLEANQLSGDLPPELGNLPQIQRLLLSSNNFTGELPETLAKFTTLQDIRIGDNQFSGKIPDFIQSWTSLQKLVIQGSGLNGPIPSGISLLKNLTDLRISDLNGSEHSPFPQLNNMTLKYLILRNCNINGTLPIYLGTMTTLKNLDLSFNKLTGPIPSNYDALRKVDYIYLTGNLLNGPVPAWTENADNVDISYNNFSTTSQGSTTCQNGNVNLFSSSTTHSDSGTVACLGSNVCQKSSYSLHINCGGKMVTEGRNTYDDDLDNGGPARFHRSGTKNWAFVTTGNFMDNDAGDYSISQNKSSLSMDNADLYMDARVSPTSLTYYGFCLGKGNYTVHLHFADIMFINDQTFNSLGRRVFDIYIQGELVQKDFNIVEEAGGIDKAIIKNFTAVVSSNTLEIRLYWAGKGTTSLPYRSVYGPLISAISVEPNFTPPSENGSSVSVGAVVGIVVAGVIVIILVLVILWWKGCLGKKSSLERELKGLDLRTGVFTLREIKVATNNFDVANKIGEGGFGPVYKGCLSDGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEEHQIRLDWPTRYKICVGIARGLAYLHEESRLKVVHRDIKTTNVLLDKDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVVLEIINGRNNTIHRPKEQSFSILEWAHLLKENGDLMDLVDRRLGSNFNKEEVLVLIRVALLCTNVTTTVRPSMSSVVSMLEGRTVVEEVFSEASDVEEKKLEKMRQYYQELSISRDEPWTSSSTSAADLYPLTLDSSYLQKRG 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00837 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 33 192 - -
Phco10g00837 997 Pfam Malectin domain 403 586 IPR021720 -
Phco10g00837 997 SMART serkin_6 663 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00837 997 SUPERFAMILY Protein kinase-like (PK-like) 647 941 IPR011009 -
Phco10g00837 997 Gene3D Ribonuclease Inhibitor 268 379 IPR032675 -
Phco10g00837 997 Gene3D Ribonuclease Inhibitor 35 199 IPR032675 -
Phco10g00837 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 401 591 - -
Phco10g00837 997 CDD STKc_IRAK 669 936 - -
Phco10g00837 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Phco10g00837 997 Pfam Protein kinase domain 664 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00837 997 Gene3D Phosphorylase Kinase; domain 1 632 738 - -
Phco10g00837 997 FunFam Leucine-rich repeat transmembrane protein kinase 201 404 - -
Phco10g00837 997 Gene3D - 399 591 - -
Phco10g00837 997 ProSiteProfiles Protein kinase domain profile. 663 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00837 997 FunFam Putative LRR receptor-like serine/threonine-protein kinase 739 946 - -
Phco10g00837 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 961 - -
Phco10g00837 997 SUPERFAMILY L domain-like 79 344 - -
Phco10g00837 997 Gene3D Ribonuclease Inhibitor 200 267 IPR032675 -
Phco10g00837 997 Gene3D Transferase(Phosphotransferase) domain 1 739 952 - -
Phco10g00837 997 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 632 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00837 Phco-Chr10 13272864 13281749 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco10g00837 Pkinase 1.8e-47 CL0016