Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00743 ATGCCGCATTATCGATTTGGGTGTTGCCGTTTCGCTTTCTTTTCTTTCTTTTGTTGTTCCACTGCGAACCAAATCTCAGTGTCATTCGCACCATTCCTTTTTGTTGCCAAGTCAATTTTGTATCCTAACTTCCACCTAACAATTGTTGCACTTCTCCACCGAGTTCGCATGCTTTGCTTTCAGTCCACAGTTTCACTGCATTGTGTATCTCTTCTTATTTCTTTTGAGTTGCTGCTGAGAATGGCTGACGACGTGGCAGGTCTAGTTGAGGCAGCGGGATCAAGATTCACTTCATTGGAACTTATTGGGCAGGGATCGTTTGGAGACGTCTATAAAGCGTTTGACAAGGAGCTCAACAGACAAGTTGCCATCAAAGTAATTGACTTGGAAGAATCAGAGGATGAAATTGATGATATCCAGAAGGAAATTTCTGTTTTGTCCCAATGTCGGTGTCCATACATTACTGAGTATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGGGGTTCAGTTGCCGATCTACTCCAAGCAGGTCATCCCCTTGATGAAATGTCAATTGCTTGCATTCTACGTGACTTGCTGCATGCTGTTGATTATCTACACGCTGAAGGGAAAATTCACAGAGATATTAAAGCTGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTAGCAGATTTCGGTGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCGTTTTGGATGGCGCCTGAGGTTATTCAGAATACTGATGGATATAATGAGAAGGCAGATATTTGGTCTTTGGGAATCACTGCTATTGAGATGGCAAAGGGGGAACCTCCACTTGCTGATCTTCACCCGATGAGAGTGCTTTTCATCATACCCCGGGAGAGTCCTCCACAGCTAGATGATCATTTTTCCCGTCCAATGAAAGAATTTGTCGCATTGTGCTTAAAGAAGGTTCCCGCTGAGAGGCCAAGTGCTAAGGAACTTTTGAAGGACCGTTTTATTCGGAATGCTAGGAGGAGTTCAAAGCTTGCAGAAAGAATAAGAGAACGTCCAAAATACCAAATAAAGGAAGAAGATCAGGAAACACCTAGAAATGTCTCAAGAGGGATGAGGGAGGCATCAGATACTGTAAAAGTGGCTAGAGATGTAAGAGGTGAAGAAAATAATCGACCCAGTGATCAGGGTAAAACCCTGAAAAGTGCTGGATGGGACTTCAATATTGGTGGATCACAGGGTACTGGAACCTTTCGTAGTGTGTCTCGACCACCTCAGTTTAGAGAGAAGAAAGCTGAAGGTTCACCTAATCAGCTAACCCAAAGAAAAGCTCCAGAGAGTGGTTATCAAGGGGGATCTGCCAATCGAAGTGCACTTAATGATTCACTTGAAAGTTCCTCTGGAAGAGATCTTAGAGTTCCCCACCATGATGAGCATCTGGACATTGAAGATGATGAATTATCTGGAAAAGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGGTCAAGACCATCTGTATTCTGTGACCAGAGCCCTCAATATAGTAGCAGCTATTCTTCCTTTGATGATGCTTCTACAAGTGGGACTGTTGTTTTACGTGGCCAGCATGATGAGCCTGGTTCTCCACAGCCACTAAGGTCTCGACTGGGACTGAACGACAGAAATTCAAATTCTTCAATGGAAGACAGTGCGGCAAATCTTGCTGAGGCAAAGGCTGCTATGCAAGGAGGGGTCAGGAGAGTGAGTTCTCGAGAAAGATTGGCCTGGGGAAAAAACAACAATGAAAGACAGGAAGACAAGAAAGATGGAAAGGCCAGCAGCTCTGATTCTTCAAGACTAAGTGTCGAACGTGACTCACACAGGGGCACGTCAAGATCACATCATGCTAATAATGATGAAGGAAGTGCTAAAATAATGTCATCCTCAGTGCCATTATCTGCTTTACTTATTCCTTCATTAAAAGAGGTCATTGCTGATGATCCAGAAGGGTCAGTTGTGCGGGCAGTTATCAATTCTTTTATAACCATGGAGGGCTCAAAACCTAAATCCTGTGATGCTCTTCTCAAACAGTTGCTTCAGCGATTGGCAAGTTCGAAGGAAGATTCACTGAAGGACCTGCAGGGACTAGCAGGCCAACTATTCAGCAAGACCAAGTCCACCGAAGAAACCCGAAGTGCAGAAGCTCATAACAGGAAAAAACAACAAAACAAGGAACATCATCCTAATAGCAATTTAAGTCCACTAGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTCAACTCATCTTGA 2343 0.4332 MPHYRFGCCRFAFFSFFCCSTANQISVSFAPFLFVAKSILYPNFHLTIVALLHRVRMLCFQSTVSLHCVSLLISFELLLRMADDVAGLVEAAGSRFTSLELIGQGSFGDVYKAFDKELNRQVAIKVIDLEESEDEIDDIQKEISVLSQCRCPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQAGHPLDEMSIACILRDLLHAVDYLHAEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRESPPQLDDHFSRPMKEFVALCLKKVPAERPSAKELLKDRFIRNARRSSKLAERIRERPKYQIKEEDQETPRNVSRGMREASDTVKVARDVRGEENNRPSDQGKTLKSAGWDFNIGGSQGTGTFRSVSRPPQFREKKAEGSPNQLTQRKAPESGYQGGSANRSALNDSLESSSGRDLRVPHHDEHLDIEDDELSGKGSGTVVIRSPKGSRPSVFCDQSPQYSSSYSSFDDASTSGTVVLRGQHDEPGSPQPLRSRLGLNDRNSNSSMEDSAANLAEAKAAMQGGVRRVSSRERLAWGKNNNERQEDKKDGKASSSDSSRLSVERDSHRGTSRSHHANNDEGSAKIMSSSVPLSALLIPSLKEVIADDPEGSVVRAVINSFITMEGSKPKSCDALLKQLLQRLASSKEDSLKDLQGLAGQLFSKTKSTEETRSAEAHNRKKQQNKEHHPNSNLSPLARFLLSRWQGQTSRDLNSS 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00743 780 Gene3D Transferase(Phosphotransferase) domain 1 93 385 - -
Phco10g00743 780 SUPERFAMILY Protein kinase-like (PK-like) 93 371 IPR011009 -
Phco10g00743 780 MobiDBLite consensus disorder prediction 480 500 - -
Phco10g00743 780 MobiDBLite consensus disorder prediction 361 650 - -
Phco10g00743 780 Pfam Protein kinase domain 97 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00743 780 MobiDBLite consensus disorder prediction 418 434 - -
Phco10g00743 780 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Phco10g00743 780 MobiDBLite consensus disorder prediction 361 382 - -
Phco10g00743 780 Coils Coil 122 149 - -
Phco10g00743 780 MobiDBLite consensus disorder prediction 728 762 - -
Phco10g00743 780 CDD STKc_MST3_like 94 368 - -
Phco10g00743 780 MobiDBLite consensus disorder prediction 733 752 - -
Phco10g00743 780 MobiDBLite consensus disorder prediction 445 479 - -
Phco10g00743 780 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 92 729 - -
Phco10g00743 780 FunFam serine/threonine-protein kinase dst1 isoform X1 93 382 - -
Phco10g00743 780 MobiDBLite consensus disorder prediction 388 407 - -
Phco10g00743 780 SMART serkin_6 96 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00743 780 ProSiteProfiles Protein kinase domain profile. 96 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00743 780 MobiDBLite consensus disorder prediction 517 545 - -
Phco10g00743 780 MobiDBLite consensus disorder prediction 597 645 - -
Phco10g00743 780 MobiDBLite consensus disorder prediction 561 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00743 Phco-Chr10 9130345 9144201 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Phco10g00743 Pkinase 1.4e-67 CL0016