Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00705 ATGGCACAGTTACCTCCCAAAATACCAACCATACCCCAAAATTGGCCATCTTTTCCTCACCAAAGGGTGCCAACAATGACCAACTTCACCCCCACAACCTCATCCACCACCACCACCACCGCTACCGCCGCCACCACCACTCCCTCCCAACCCTCTTGGGTCGACGAGTTCCTCGACTTCTCCTCGACCCGGCGGGGGGCTCACCGACGATCCGCCAGTGACTCCATTGCCTTCCTGGAGACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGACCGACTCGACGAGGACCAGCTGATTTCTATGTTCTCTGACGACATTGCCGCAGCGGCACTCCCGCCTCCGCCGCTTTCATCGGCGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGGCGTTGGACGTGAAGCCGAAGACCGAATCGGTTGAAGAGGAGAGCTCGTGCAAGAATGAGGCGGCGGCGCTGCAACTCTCCGCCACTGCCACCTGCGCTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCAGCACAGAGATCAAGGGTAAGAAAGCTACAATACATCTCTGAGCTTGAAAGGAGCGTAACAACCTTGCAGACGGAGGTATCAGCATTGTCACCACGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAGGCATTAAAGAAGGAAATAGAGAGATTGAGGCAAATCTACCACCAACAGAACCTGCAGAAGATGAGTAACACAGTGAACAACAATCTTCAAACGGCACCAACATCACAGCCACAAGCAGCTATGCAATCACATTCCCTTCATCAGCATCAGCATCAGATGACAGTGTCTCAACCATTGGGATGCAAGGACAAGGAGCAGCTCTTGAGTTGA 993 0.5257 MAQLPPKIPTIPQNWPSFPHQRVPTMTNFTPTTSSTTTTTATAATTTPSQPSWVDEFLDFSSTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDIAAAALPPPPLSSASNPSSPSSDQNSNNEEKPMAMALDVKPKTESVEEESSCKNEAAALQLSATATCAETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMSNTVNNNLQTAPTSQPQAAMQSHSLHQHQHQMTVSQPLGCKDKEQLLS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00705 330 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 179 231 IPR004827 GO:0003700|GO:0006355
Phco10g00705 330 MobiDBLite consensus disorder prediction 288 320 - -
Phco10g00705 330 MobiDBLite consensus disorder prediction 288 330 - -
Phco10g00705 330 MobiDBLite consensus disorder prediction 1 20 - -
Phco10g00705 330 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 184 199 IPR004827 GO:0003700|GO:0006355
Phco10g00705 330 MobiDBLite consensus disorder prediction 111 135 - -
Phco10g00705 330 Pfam bZIP transcription factor 181 225 IPR004827 GO:0003700|GO:0006355
Phco10g00705 330 SMART brlzneu 177 241 IPR004827 GO:0003700|GO:0006355
Phco10g00705 330 SUPERFAMILY Leucine zipper domain 181 235 IPR046347 GO:0003700|GO:0006355
Phco10g00705 330 CDD bZIP_plant_RF2 182 232 IPR044759 GO:0003700|GO:0006355
Phco10g00705 330 Coils Coil 260 280 - -
Phco10g00705 330 PANTHER BASIC LEUCINE ZIPPER 34 1 304 - -
Phco10g00705 330 MobiDBLite consensus disorder prediction 27 50 - -
Phco10g00705 330 FunFam Basic leucine zipper 61 180 253 - -
Phco10g00705 330 Gene3D - 180 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00705 Phco-Chr10 8535323 8537832 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco10g00705 bZIP_1 8.5e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00705 10 8535323 8537832 Phco10g00705 10 8535323 8537832 ECH