Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00661 ATGAGGAATGCCTTGATTATAGCCTTTTCCATAACCATATGCTTCATCGCTTTTGTGATATCCAAGATTGTTATTTCAGTCCTCCTCTACAAAAGATGGAGAAGAAAACAGATGGTTCATGAAGAAGGCTATCCAGGAGGGAAGATAGTACTATTTAGGTCCTCCGAACTTAAATCTCTCACAGCTGATGCGATCTTAAAGAAGACACAGAAACTGAACAACAAGGACATCATTGGGTCAGGTGGTTACGGTGTAGTTTATGGACTAAAACTAGATGAGTCCACAGCCTTGGCAGTAAAAAAACTAAACCGTGGAACTGCCGAGAGAGATAAAGGTTTTGAGAGAGAATTGGAAGCAATGGCAGACATTAAACACCGCAACATTTTGACCCTTCATGGATATTACACTGCACAACACTACAATCTTCTCATATATGAGCTAATGCCCAATGGAAGTTTGGACTCCTTTTTGCATGGGAGATCAAGGGACAAGAAGTTTTTGGATTGGCCAACCAGATATAGAATAGCTGCAGGTGCAGCTAGAGGAATATCGTATCTTCATCATGATTGCATCCCTCGCATTATCCACAGAGACATCAAGTCAAGTAACATATTGTTGGATGAAAATATGGATGCCCGAGTTTCTGATTTTGGATTAGCCACTTTGATGCAACCAAATAAAACTCATGTCTCAACATTAGTGGCTGGAACTTTCGGATACTTGGCACCTGAATATTTTGATACAGGAAGGGCGACACTCAAAGGGGATGTTTACAGCTTTGGAGTTGTTTTACTGGAGCTTTTAACTGGGAAAAAACCCAGTGATGAAGCATTTATGGAAGAGGGAACCATGCTTGTCACATGGGTGAAGGCTGTTGTTAGAGAGAACAAGGAGGATTTAGTCCTTGATAGTAGCTTAGGATCTTGTTCAATGCAAGAGGTAAATAAGGTGTTCAACATTGCAATGATGTGTCTTGAACCAGATCCTTTGAAGAGGCCAACCATGGGTGATGTTGTCAAAATGCTTGACCAAACAGAACAAGATAAACTTGTCACGGAATCCTGA 1065 0.4094 MRNALIIAFSITICFIAFVISKIVISVLLYKRWRRKQMVHEEGYPGGKIVLFRSSELKSLTADAILKKTQKLNNKDIIGSGGYGVVYGLKLDESTALAVKKLNRGTAERDKGFERELEAMADIKHRNILTLHGYYTAQHYNLLIYELMPNGSLDSFLHGRSRDKKFLDWPTRYRIAAGAARGISYLHHDCIPRIIHRDIKSSNILLDENMDARVSDFGLATLMQPNKTHVSTLVAGTFGYLAPEYFDTGRATLKGDVYSFGVVLLELLTGKKPSDEAFMEEGTMLVTWVKAVVRENKEDLVLDSSLGSCSMQEVNKVFNIAMMCLEPDPLKRPTMGDVVKMLDQTEQDKLVTES 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00661 354 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 148 354 - -
Phco10g00661 354 Gene3D Phosphorylase Kinase; domain 1 48 147 - -
Phco10g00661 354 Gene3D Transferase(Phosphotransferase) domain 1 148 353 - -
Phco10g00661 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Phco10g00661 354 ProSiteProfiles Protein kinase domain profile. 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00661 354 FunFam Receptor-like serine/threonine-protein kinase 43 147 - -
Phco10g00661 354 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 347 - -
Phco10g00661 354 SMART serkin_6 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00661 354 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Phco10g00661 354 SUPERFAMILY Protein kinase-like (PK-like) 53 342 IPR011009 -
Phco10g00661 354 Pfam Protein kinase domain 74 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00661 Phco-Chr10 7699893 7702029 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Phco10g00661 Pkinase 1.9e-47 CL0016