Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00609 ATGGCCCCTGCCAGTGCCACCACTCTCTTCTCCTCTAACCCCATGTTTCCTTCTGACAACCACTATCTCTCCCCCTCTCCAACCATTCCCAAATCCTTCACTGGCCTCTGCAAGCCCTTCCATTCGAGGGTTCCCACTTCCATCCCCTTCTTCCATTGCAGAAGACCAAAGTTCTTTGTCAGAGCCACTGTAATAAAGTGGAGATGTCCAAAGCAAAGCCTCCCCTCCAACTGTGATACTGGTTTCCAAAAGAAACTCCTCTATCTAGAATCCATTGGTATTGACTCTTTCTCACTTATTGAAAATCATCCAACGCTGATCACTACCTCTCTTACAGACATAAAATCCACCGTGGAATACATTACCTCCATGGATTTCACTGCAATCGAGTTTCGCCGTATTGTTGGCATGTGCCCTGAGATTCTGACCACCAATGTTTCAGACATCATACCTGTCTTAACCTTCCTTCATCGTGAGGTTCATGTGTGTTGTTCAGACATTAAGCGGGTTATAAATCGCCGTCCCAGGTTGCTTGTCTGCAGTGTTAGTAAGCGACTTCGTCCTACCCTATACTTCCTCCAAAGTATTGGCATAGAAGAGGTAAACAAGCATACTGACTTGCTATCATGTAGTGTTGAAGAAAAGTTCATGCCCAGAATTGATTACTTTGAGAATATTGGGTTTTCTCGCCGGGATTCAACTTTAATGTTTCGCAGATTTCCTCAGCTGTTTTGTTATAGTATTAAAAATAATTTGGAGCCTAAATACAGTTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGCTGATAGAATTTCCACAGTATTTCTCATTTAGCCTAGAGAATAGAATTAAGCCTAGGCATAAAAACTGTGTAGAAATGGGGGTGTGTTTTCCTCTCCCTGACATGTTAAAAACAAAGGAAGTGAAATTTCAAAGTAGATTGGAAGTATTTGTAAATTCTTCAACACCCTTGAAAACATCCCCTCTGTGGCGTGCTGGCTGTGATTTTTAA 1017 0.4248 MAPASATTLFSSNPMFPSDNHYLSPSPTIPKSFTGLCKPFHSRVPTSIPFFHCRRPKFFVRATVIKWRCPKQSLPSNCDTGFQKKLLYLESIGIDSFSLIENHPTLITTSLTDIKSTVEYITSMDFTAIEFRRIVGMCPEILTTNVSDIIPVLTFLHREVHVCCSDIKRVINRRPRLLVCSVSKRLRPTLYFLQSIGIEEVNKHTDLLSCSVEEKFMPRIDYFENIGFSRRDSTLMFRRFPQLFCYSIKNNLEPKYSYFVVEMGRDLKELIEFPQYFSFSLENRIKPRHKNCVEMGVCFPLPDMLKTKEVKFQSRLEVFVNSSTPLKTSPLWRAGCDF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00609 338 SMART mt_12 168 199 IPR003690 GO:0003690|GO:0006355
Phco10g00609 338 SMART mt_12 97 127 IPR003690 GO:0003690|GO:0006355
Phco10g00609 338 SMART mt_12 200 229 IPR003690 GO:0003690|GO:0006355
Phco10g00609 338 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Phco10g00609 338 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Phco10g00609 338 SMART mt_12 234 266 IPR003690 GO:0003690|GO:0006355
Phco10g00609 338 FunFam Transcription termination factor MTEF1, chloroplastic 156 320 - -
Phco10g00609 338 Gene3D Transcription termination factor 3, mitochondrial 138 322 IPR038538 -
Phco10g00609 338 Pfam mTERF 160 313 IPR003690 GO:0003690|GO:0006355
Phco10g00609 338 Pfam mTERF 68 166 IPR003690 GO:0003690|GO:0006355
Phco10g00609 338 PANTHER CGI-12 PROTEIN-RELATED 97 321 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco10g00609 mTERF 4.7e-34 No_clan