Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00557 ATGAGCAACATAAGCATGGTGGAGGCAAAGTTGCCACCAGGGTTCAGGTTCCATCCAAGAGATGAAGAGCTTGTCTGTGATTACTTGATGAAGAAGCTCACACACAATGATTCCCTTCTCATGATAGATGTTGACCTTAACAAGTGTGAACCTTGGGATATTCCTGAAACAGCATGTGTGGGTGGGAAAGACTGGTATTTCTATACACAAAGAGACCGTAAGTATGCAACAGGGTTACGCACAAATCGTGCCACTGCCTCAGGGTACTGGAAGGCCACGGGGAAGGACAGGCCTATCCTTCGCAAGGGCACCCTTGTTGGTATGAGGAAGACTTTGGTGTTCTATCAAGGAAGGGCACCCAAAGGGAGAAAAACTGAGTGGGTCATGCATGAGTTTCGCATAGAAGGTCCCCATGGACCCCCTAAGGTTTCTTCTTCTAAGGAAGACTGGGTTTTGTGTAGAGTGTTCTACAAAAGCAGAGAAGTTTCAGCCAAACCTAGCATGGGTAGCTGCTATGAAGACACAGGCTCTTCATCTCTTCCTGCATTAATGGACTCTTACATTAGTTTTGATCAAACTCAAGCTCATGCAGATGAGTTTGAGCAAGTGCCCTGCTTCTCCATTTTCTCTCAGAACCAAGCAAACCCCATTTTCAACAACATGACCACCATGGAGCCTAAATTACCTGCAACTACATATGGAGGAGCACCAAATTTGGGTTACTGTTTAGACCCTTTATCCTGTGACAGAAAAGTGTTGAAAGCTGTTTTGAATCAGATCACAAAAATGGAAAGGAATCCTCTGAACCAAAGTCTTAAAGGGTCTACAAGCTTTGGAGAAGGAAGCTCAGAGAGTTACCTATCTGAAGTGGGGATGCCTCACATGTGGAACAATTACTGA 900 0.45 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKLTHNDSLLMIDVDLNKCEPWDIPETACVGGKDWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPKVSSSKEDWVLCRVFYKSREVSAKPSMGSCYEDTGSSSLPALMDSYISFDQTQAHADEFEQVPCFSIFSQNQANPIFNNMTTMEPKLPATTYGGAPNLGYCLDPLSCDRKVLKAVLNQITKMERNPLNQSLKGSTSFGEGSSESYLSEVGMPHMWNNY 299
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00557 299 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Phco10g00557 299 SUPERFAMILY NAC domain 2 158 IPR036093 GO:0003677|GO:0006355
Phco10g00557 299 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 210 - -
Phco10g00557 299 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Phco10g00557 299 FunFam NAC domain-containing protein 100-like 20 162 - -
Phco10g00557 299 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco10g00557 Phco-Chr10 6125477 6129595 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco10g00557 NAM 7.1e-36 No_clan