Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00508 ATGCAGAAACATCAATACAATTCCATGGAATCTAGAAATGAGGAATTCCATTCTGCATCGCAGTTGGTCCCACAAGACCTTCGTGATGGCATGCATATCAATCCACGGCCTCCAGCTTATAATATGTCAGAAAATAAACCTGTACTTAATTATTCCATACAGACAGGTGAGGAATTTGCTCTGGAGTTTATGAGAGATAGGGTGAATCTGAGGAAGCCTCCCTTTCCAAATGTTGTGGGTGATCCCAACTATTCAACAGGCTATATGGAATTGAAAGGCATTTTGGGACATACAGGATCTGAGTGTGGATCTGATATATCTGTGCTCACAAAGACTGAGAAGGGTCCAAATGAGTTTGACAGAAGGAACTCTTCTCAACACCAGGACAGAAGTACTTATGGTTCAGCTCGATCAATTCCTAGAACTTCATCTAATCAAGAAAGTTACCGAGTCCTTCATGGTACTGCCTCTTCCAGTGCATCTGAAATTTCATCCGTGAAGATGAAGGTTCTATGCAGCTTTGGGGGTAGAATATTGCCAAGGCCTGGTGATGGAAAGCTTAGATATGTTGGGGGTGAAACGCGTATTATTACTATAAGAAGGGACATACGTTTTCAGGAGCTTATGCAGAAAACATCATTAATTTATAGTGAAGCTCACGTGATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCGTTAGTTTCAGTATCTTCTGATGAGGATCTGCGGAATATGATGGAGGAATGCCATGATTTACAAGGCGAACGAGGATCAACAAAGCTTAGGATGTTTCTGTTCTCTATAAATGATTTGGATGATACACAGTTTGGCATTGGAAGCATTGACGGTGATTCTGAAATCCAGTATGTTGTTGCTGTTAATGGCATGAACATGGATTCAAGAAACAACTCAATCCTTCATGCTGCAAGCGGCTCTACCAATAACTTGCATGAATTGAATGAACAAAATAACGAGAGGGAGACCAACAGAGTTTTGATGGACTCATTTGGTGTTAGTAGCTCATCTTTGGCTGACAATGTGAAATCATCATTGACTATTCAATCTTCACAACAAATGCTTCCAATCTCCTCTAATGCTTATGATACCCATCCATTGTTTTATGATGACCAGGTTATTCACCAAGGGGAAGCTAGTCAATATCCACTACAGCACGGTCTTGGTCCTTCTAACAAATCCGCTCGCAATCTTGGAGAGATTCCAGTTTCTATGCCTATTCATAATCTTGTTAACCAAGGGATCATGAATGATGGACAAACATCTAGTGAGTTGCAGGTACAAATTTCAGCTATGCCAGACATGTTGGTAAAAAGAAAGGGTGATAATTTCATTCATACAGGCAATGATACAGGAAAAGTTTTCCCCTTAGAAGCACCATATCCTATTGCTTTGCAGCCATTTGAGGGAAATTTGCATGCTAATTTACCAGAGGCACCATTTACTGCTGCTATATCAGAAGGCCTTCATCCTGCACTGCCATCAAAGAACAAGGGTAAGCACCAGCAGTCTGAAGATGCCTATTCATTAATCGGTAGTATGAATCCCACACAGACTCCTAAGTCTGGTGAAGATGATTTCTATACTACACCCACTGATGCATTCAGCCGTGCTCAGGTTGATGCTGAGTCCAATGTGATTGATTTTGGTTGCCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCAAGGGAGCAGGCTGATTTGCTGAATCGATCTACAAAGTCAGATGATGCGCATGGTTCTCACTTACTCATGTCAGATTTGCTTTCTGACTTCAGCCAGAAGAATTCAGAAACAGAATCCAACGACATATTGCACAATGGGAATATGTCAAATCTGAACATTATGTCCAGCTCAGCACCAAAGCCTTTGCAAGCAGATGGCAATACCACTGATGATGGATTTGCCCCACCACCAACATACAAAAAATGGCCTGATACAACAAATAAGTTGAATTCAAAGTTATCACTGCATGTGAATTCTGAGTTGAAGCAAGTGTCAGCAGATAATAAAGTTTCTAGAATTGAGGACCAGGTCCTTTATCCTGAAAACAATATCAATCGCTCCAAAGACAACCATAACATCCTCTTAGTTGATGAAACCAAAGGTACTGGACATCTGGCATTTCACCAGGTTCTTCCTGTTGAAAATCTGAATCTGGCATCGAAACCTCCAGACCTCAATTTGGTTGAAGTTTCTACCAGGGAATCGGATAACGGTACCAAGGTTCAAGCTCTGCCTTTTCCTTCAACTGGAAACACAGGCCAAGATGTTTCTCAAAATTTCCCCCCAGAAGTTAAACCAAAATCTACTACTCAGGGAGACATTCTTATTGATATTGAGGACAGGTTTCCCCGTGATATCCTTTATGATATGTTCTCCAAAGCAATACTTTCCGAAGATTCCTCAAGTATTGGTCCGTTACCAACAGATAGAGCAGGTTTGAGCTTAAACATGGACAATCATGAGCCTAAACGTTGGTCATATTTTCAGAACTTTGCCCAAGAGGGGTTTGATAATGTTTCTCTAATTGATCAGGACAATCTTGGTTTTTCGTCTGCAGTGAGGAAAGTTCAAGATGGGGATAGTAAATCTCAGCAGTCTGCTGCTCTACTGGCAGATAGTGCTTTGGCAGGACACAAGGAATCCCACCTAAATTTCGGTGGTGACGAAAATCAGAAAAATGTACCGGCAACAACTAAAACAGAATCCACTCTCGTTCAACAAAAATATGAGCATTCCCAACTAAAGGGCAATGAAAATAAGAACATAGACGCCATAATGGAAAATATAAGACCACAGGAATCTGAATACCAGGAGGATGACAAGAACGAAGCAAGGAATGTGGGTTTAGCAGGGGATTTTGACATCAGTGTGCAGTTCATAAAGAATGATGATCTTGAAGAGCTGCGAGAGCTGGGTTCTGGTACCTTTGGGACTGTATACCATGGAAAGTGGAGGGGATCGGATGTTGCTATTAAAAGAATAAAGAAAAGCTGTTTCGCTGGTCGATCTTCAGAACAAGAGAGACTGACCATAGAATTCTGGCGTGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTTCAGGATGGACCAGGAGCAACATTAGCGACTGTCACTGAGTACATGGTGGATGGTTCTCTCAGGAATGTTTTGCTTCGTAAGGATAGATATCTTGATCGCCGTAAGAGGTTGATAATAGCCATGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAGATATCGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCCTATCAAAAATTAAGAGAAACACCCTGGTGTCTGGTGGTGTTCGAGGAACTCTACCTTGGATGGCACCAGAGCTTCTAAACGGTAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTCTTCTCTTTCGGCATTGTCTTATGGGAGATTCTTACTGGTGAAGAGCCATATGCTAATATGCACTATGGTGCTATTATTGGAGGTATTGTGAATAACACATTGAGACCTACAATCCCAGGTTACTGTGATCTTGAGTGGAAAACACTAATGGAGCAGTGTTGGGCACCCAATCCTGCAGTTAGGCCATCCTTCACAGAAATTGCTCGCCGTTTGCGTGTGATGTCTGCAGCTGCTATTCAGAACAAAGGACAGCTCCACAAGGCATCTAAATGA 3786 0.4173 MQKHQYNSMESRNEEFHSASQLVPQDLRDGMHINPRPPAYNMSENKPVLNYSIQTGEEFALEFMRDRVNLRKPPFPNVVGDPNYSTGYMELKGILGHTGSECGSDISVLTKTEKGPNEFDRRNSSQHQDRSTYGSARSIPRTSSNQESYRVLHGTASSSASEISSVKMKVLCSFGGRILPRPGDGKLRYVGGETRIITIRRDIRFQELMQKTSLIYSEAHVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQGERGSTKLRMFLFSINDLDDTQFGIGSIDGDSEIQYVVAVNGMNMDSRNNSILHAASGSTNNLHELNEQNNERETNRVLMDSFGVSSSSLADNVKSSLTIQSSQQMLPISSNAYDTHPLFYDDQVIHQGEASQYPLQHGLGPSNKSARNLGEIPVSMPIHNLVNQGIMNDGQTSSELQVQISAMPDMLVKRKGDNFIHTGNDTGKVFPLEAPYPIALQPFEGNLHANLPEAPFTAAISEGLHPALPSKNKGKHQQSEDAYSLIGSMNPTQTPKSGEDDFYTTPTDAFSRAQVDAESNVIDFGCLEPPPLPNRVYYSERIPREQADLLNRSTKSDDAHGSHLLMSDLLSDFSQKNSETESNDILHNGNMSNLNIMSSSAPKPLQADGNTTDDGFAPPPTYKKWPDTTNKLNSKLSLHVNSELKQVSADNKVSRIEDQVLYPENNINRSKDNHNILLVDETKGTGHLAFHQVLPVENLNLASKPPDLNLVEVSTRESDNGTKVQALPFPSTGNTGQDVSQNFPPEVKPKSTTQGDILIDIEDRFPRDILYDMFSKAILSEDSSSIGPLPTDRAGLSLNMDNHEPKRWSYFQNFAQEGFDNVSLIDQDNLGFSSAVRKVQDGDSKSQQSAALLADSALAGHKESHLNFGGDENQKNVPATTKTESTLVQQKYEHSQLKGNENKNIDAIMENIRPQESEYQEDDKNEARNVGLAGDFDISVQFIKNDDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEYMVDGSLRNVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKDIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPGYCDLEWKTLMEQCWAPNPAVRPSFTEIARRLRVMSAAAIQNKGQLHKASK 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00508 1261 MobiDBLite consensus disorder prediction 128 153 - -
Phco10g00508 1261 CDD STKc_MAP3K-like 985 1242 - -
Phco10g00508 1261 MobiDBLite consensus disorder prediction 1 20 - -
Phco10g00508 1261 Gene3D Transferase(Phosphotransferase) domain 1 1066 1261 - -
Phco10g00508 1261 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 187 269 - -
Phco10g00508 1261 Pfam PB1 domain 184 267 IPR000270 GO:0005515
Phco10g00508 1261 SUPERFAMILY Protein kinase-like (PK-like) 966 1241 IPR011009 -
Phco10g00508 1261 CDD PB1_UP2 171 267 - -
Phco10g00508 1261 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1104 1116 IPR008271 GO:0004672|GO:0006468
Phco10g00508 1261 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1067 1259 - -
Phco10g00508 1261 SMART serkin_6 979 1245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00508 1261 MobiDBLite consensus disorder prediction 746 780 - -
Phco10g00508 1261 MobiDBLite consensus disorder prediction 630 659 - -
Phco10g00508 1261 Pfam Protein tyrosine and serine/threonine kinase 980 1242 IPR001245 GO:0004672|GO:0006468
Phco10g00508 1261 SUPERFAMILY CAD & PB1 domains 184 275 - -
Phco10g00508 1261 PRINTS Tyrosine kinase catalytic domain signature 1098 1116 IPR001245 GO:0004672|GO:0006468
Phco10g00508 1261 PRINTS Tyrosine kinase catalytic domain signature 1213 1235 IPR001245 GO:0004672|GO:0006468
Phco10g00508 1261 PRINTS Tyrosine kinase catalytic domain signature 1061 1074 IPR001245 GO:0004672|GO:0006468
Phco10g00508 1261 PRINTS Tyrosine kinase catalytic domain signature 1169 1191 IPR001245 GO:0004672|GO:0006468
Phco10g00508 1261 SMART PB1_new 182 269 IPR000270 GO:0005515
Phco10g00508 1261 ProSiteProfiles Protein kinase domain profile. 979 1244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00508 1261 PANTHER SERINE-THREONINE PROTEIN KINASE 212 1243 - -
Phco10g00508 1261 Gene3D - 186 269 - -
Phco10g00508 1261 MobiDBLite consensus disorder prediction 112 153 - -
Phco10g00508 1261 Gene3D Phosphorylase Kinase; domain 1 966 1065 - -
Phco10g00508 1261 MobiDBLite consensus disorder prediction 746 782 - -
Phco10g00508 1261 ProSitePatterns Protein kinases ATP-binding region signature. 985 1010 IPR017441 GO:0005524
Phco10g00508 1261 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 972 1066 - -
Phco10g00508 1261 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00508 Phco-Chr10 5289436 5296406 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Phco10g00508 PK_Tyr_Ser-Thr 3.3e-61 CL0016