Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00506 ATGGAAACTAGACTTGATGAATGGCACCAGTCTGGATCACAGCCAGTGATGCAGGACCATCTGGATGGCACACATACCTGTAGAAGACCAGTTGACCTTAATACATCAGAAGTTAAACCTGTACTTAATTACTCTATACAGACAGGTGAAGAATTTGCTCTTGAGTTTATGAGAGATAAGGTGAATATGAGGAAGCCTGTATTATCAGATGTCAGTGATTCAAATTATACTCCAGGTTATATGGAACTGAAAGGCATTTTAGGCATCAGCCATGCAGGATCTGAAAGTGGATCTGATATCTCTATGCTTTCAATGGCTGAGAAATATCCAAAAGAATTTGATAGAACGAGTACATTATTACCTGGAGACAAAATCAACTATGGGTCTATTCGGTCAATGCCAAGAACTTCATTGAATCAGGACAACAGACAATTTGTGCCTGGGTATGGCTCTTTCGGAGCTTATGATAGATCAATGATTATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTGCCACGACCATGCGATGGACATCTAAGGTATGTTGGAGGCCAAACACGTATTCTTCGAATAAGAAAGGACATATCTTGGCTGGAGCTCATGCAGACAGCCTTACAAATCTATAGTCAGGTTTATGCAATAAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATCTGATGAGGATTTGCAGAATATGTTGGAGGAATGTAATCATCTACAAGATAGGGAAGGATCACAAAAGCCTAGGATGTTTTTATTCTCAATGAGTGATTTGGAGGATGCTCAATTTGGTCTCAGCAGTATGGGTGATGATTCTGAGATTCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAAAAACACTACCATGATTGGTGTCAGCGTTTCTGCAAATGACGTAAATGAATTGGACAGGCAAAGTATTGACAGGGAGACTAATAATGGAGTTGGTATGGAATCTATTGTACAAGGAAATCCTCCCCCAACTAACAATTTTGACTCATCATTGGCTTCTCAATCTTCACCATCAGTGCTACCAACTTCCTCGAATTCTTATGAAAAATATCCACTGTTTTATGGTGATCAAATGATGTGGCATGGGGAGCTTAGTAATAGTAATCAATACTTTATTAATCATGGCCTTGATCCTTCTCATAAACCTGTTATTGGAGAGACTTCGATGATTATGCCTCCCCATATGCTTGTCAATCAACAAGGGATTTTGAGTGAAGGTCTTCTGCCTCGAGGAATGCAAGTACAAAATTCAGAAATACCAACAACATTTGCAAACAAGATGGTTATTAGTTCAATTCCACAAGTAAGTGACCCTGGGAAAATTTTGGCCTCAGAATTACCATCACCCCCTCCTACTCAACTGCTTAATGGTTACATTAAAAATAATTTTCCTGAAGCATCTGTTGTAGTTACTGCACCAGAGGGGTTTTCATTGCATCCTCCAAACATGGACAAGCACCAAGATTATGAAGAGGCTTCTTCTACATGTAGCAGTGCATTTGGTCCTACTTATGTTGATTCCCACTCCAATGCATCTGACTTGAGTTCTCTTCATCCTCCTCCTCTTCCAAAGAGAGTTTACTATTCGGAGAGAATTCCACGGAAAGAAGTAGAGTTGCTGAACCGGTCCTCAAAATCCGATGATACACACAACTCTCAGTTTCATGTTTCAGATTTACTATCTGATGTCAACCCACCAGATTCAGTTAGAGAATCAGTTGACAAGTTGCGTGATGGAAATCTGCCTAATCTAAATGAGGAATTAAGCATCACAGAAAATCCATTGCATGCAAATGTCTTTGCTGTTGATAATGGGACTGCCAATAATCAAATATACAAACAGCTGCCTGATACAAGCACTCAGATAAAATCAAAGCTAACTGAGCATGTGAATCCTGAGCTAAGGCAGGTATTACCGGACAATGAAGGACACACAAATGTGTTAAATAAAGATAATGTTGTTGGGTTGGAAATGGAAATTTATAGTAATAATAACCATAACAAACCCCTGATTGATGAGACAAAAGCCAATAAACTTGACTTGCATAATTTGCACCAGGTTTCTTCTGGTAAGAACCTTGATGATCCTGCATCCAATCTTCCAGAGGTTGATTGGGGTGATACCTCCGTGAAGGAGTCTAATGACAATATTAATGTGCAAGCCTTAGCTGTATCTCGAAATGGTAATATAGATGATGATTTCGAAGAATTTCCTTTAGATGTCGTTTCAAAACAAGCACATGTTGACATCCTTATTGATATTAATGATCGGTTTCCCCGTGAATTTTTTACTGATATATTCTCTAAAGTAGTACTTGAAGAAGATCCCTCTAGTTTCCATCCATTAAACTCAAATGGAGTGGGCTTAAGTGTAAACATGGAAAATTGTGAACCTAAACGATGGTCTTATTTTCAAAAATTGGCTCAAGCAGGGATTGATAATGTGTCTCTTATTGACCAAGATCATCTTGGTTTTGCACCTGCGATAGGAAAAGTGGTTGGAGATGATAGGACTCAACATGTTACACCTTTAACAACTGATGAGGCTTCTCTGAACCATGCAGAGTCCCACCTCAATTTTGTTGAAGAAAATTTGCTTGGAAGGATTGGACCAGAAACGAAATCTAACTATGATCATTCCCAAGTGAATGACACTGAAAGTATGCAATTTTCCGCCATGATGGAAAACATTAGAGCTCAAGAGTCAGAATGTGAGGTTGGGATGTTTGAAAAAAGGAATAGCAATGTACATCCTCTTGATCCTTCTTTGGAAGAGTTTGATGCGAGTTCTTTACAGGTCATAATGAATGACGATCTTGAAGAGCTGAAGGAACTGGGTTCTGGTACCTTTGGGACAGTGTATCATGGAAAATGGCGAGGAACAGATGTTGCCATCAAAAGAATAAAGAAAATATGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTCTAGAATTCTGGCGGGAAGCTGATATTCTTTCCAAGCTTCATCATCCTAATGTGGTGGCATTTTATGGTGTAGTGCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTGTTACTTCGCAAGGATAGGTATCTTGATTTTCGTAAAAGACTGATAATTGCAATGGACGCAGCTTTTGGAATGGAATATTTACACTCAAAAAATATTGTACACTTTGACTTAAAATGTGACAATTTGTTGGTGAATATGAAAGATCCTATGCGGCCTATATGCAAGGTTGGGGATTTTGGATTGTCAAAAATTAAAAGAAATACCCTGGTTTCTGGTGGTGTGAGAGGAACTCTTCCTTGGATGGCACCAGAGCTTCTGAATGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGGGGGATCGTGAATAACACGTTAAGGCCAACAATACCAAATCATTGTGATTCTGAATGGAGAACACTAATGGAGCAGTGTTGGGCACCCAATCCTGCAGCTAGGCCCTCCTTCACAGAAATAGCCAGTCGATTGCGCATAATGTCTGCAGCAGCTAAATCATCGGGCCAAAAGGCATCTAAATGA 3702 0.399 METRLDEWHQSGSQPVMQDHLDGTHTCRRPVDLNTSEVKPVLNYSIQTGEEFALEFMRDKVNMRKPVLSDVSDSNYTPGYMELKGILGISHAGSESGSDISMLSMAEKYPKEFDRTSTLLPGDKINYGSIRSMPRTSLNQDNRQFVPGYGSFGAYDRSMIMKFLCSFGGRILPRPCDGHLRYVGGQTRILRIRKDISWLELMQTALQIYSQVYAIKYQLPGEDLDALVSVSSDEDLQNMLEECNHLQDREGSQKPRMFLFSMSDLEDAQFGLSSMGDDSEIQYVVAVNGMDLGSRKNTTMIGVSVSANDVNELDRQSIDRETNNGVGMESIVQGNPPPTNNFDSSLASQSSPSVLPTSSNSYEKYPLFYGDQMMWHGELSNSNQYFINHGLDPSHKPVIGETSMIMPPHMLVNQQGILSEGLLPRGMQVQNSEIPTTFANKMVISSIPQVSDPGKILASELPSPPPTQLLNGYIKNNFPEASVVVTAPEGFSLHPPNMDKHQDYEEASSTCSSAFGPTYVDSHSNASDLSSLHPPPLPKRVYYSERIPRKEVELLNRSSKSDDTHNSQFHVSDLLSDVNPPDSVRESVDKLRDGNLPNLNEELSITENPLHANVFAVDNGTANNQIYKQLPDTSTQIKSKLTEHVNPELRQVLPDNEGHTNVLNKDNVVGLEMEIYSNNNHNKPLIDETKANKLDLHNLHQVSSGKNLDDPASNLPEVDWGDTSVKESNDNINVQALAVSRNGNIDDDFEEFPLDVVSKQAHVDILIDINDRFPREFFTDIFSKVVLEEDPSSFHPLNSNGVGLSVNMENCEPKRWSYFQKLAQAGIDNVSLIDQDHLGFAPAIGKVVGDDRTQHVTPLTTDEASLNHAESHLNFVEENLLGRIGPETKSNYDHSQVNDTESMQFSAMMENIRAQESECEVGMFEKRNSNVHPLDPSLEEFDASSLQVIMNDDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDFRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNMKDPMRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNHCDSEWRTLMEQCWAPNPAARPSFTEIASRLRIMSAAAKSSGQKASK 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00506 1233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1079 1091 IPR008271 GO:0004672|GO:0006468
Phco10g00506 1233 PANTHER SERINE-THREONINE PROTEIN KINASE 205 1218 - -
Phco10g00506 1233 CDD STKc_MAP3K-like 960 1217 - -
Phco10g00506 1233 SUPERFAMILY Protein kinase-like (PK-like) 942 1217 IPR011009 -
Phco10g00506 1233 ProSiteProfiles Protein kinase domain profile. 954 1219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00506 1233 SUPERFAMILY CAD & PB1 domains 177 264 - -
Phco10g00506 1233 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1042 1233 - -
Phco10g00506 1233 Gene3D Phosphorylase Kinase; domain 1 947 1041 - -
Phco10g00506 1233 SMART serkin_6 954 1220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco10g00506 1233 Pfam Protein tyrosine and serine/threonine kinase 955 1217 IPR001245 GO:0004672|GO:0006468
Phco10g00506 1233 MobiDBLite consensus disorder prediction 543 567 - -
Phco10g00506 1233 Gene3D - 181 261 - -
Phco10g00506 1233 Pfam PB1 domain 178 260 IPR000270 GO:0005515
Phco10g00506 1233 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 947 1041 - -
Phco10g00506 1233 MobiDBLite consensus disorder prediction 522 586 - -
Phco10g00506 1233 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 180 262 - -
Phco10g00506 1233 SMART PB1_new 175 262 IPR000270 GO:0005515
Phco10g00506 1233 MobiDBLite consensus disorder prediction 1 22 - -
Phco10g00506 1233 ProSitePatterns Protein kinases ATP-binding region signature. 960 985 IPR017441 GO:0005524
Phco10g00506 1233 Gene3D Transferase(Phosphotransferase) domain 1 1042 1233 - -
Phco10g00506 1233 CDD PB1_UP2 164 260 - -
Phco10g00506 1233 MobiDBLite consensus disorder prediction 321 357 - -
Phco10g00506 1233 PRINTS Tyrosine kinase catalytic domain signature 1073 1091 IPR001245 GO:0004672|GO:0006468
Phco10g00506 1233 PRINTS Tyrosine kinase catalytic domain signature 1144 1166 IPR001245 GO:0004672|GO:0006468
Phco10g00506 1233 PRINTS Tyrosine kinase catalytic domain signature 1036 1049 IPR001245 GO:0004672|GO:0006468
Phco10g00506 1233 PRINTS Tyrosine kinase catalytic domain signature 1188 1210 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00506 Phco-Chr10 5277651 5286379 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Phco10g00506 PK_Tyr_Ser-Thr 1.2e-63 CL0016