Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00501 ATGCCCCTCTCTCCCTCTTCCATGGCCTCAATCCCACAGTTCTATCCAAACTACACGTTCACTACTCACGATCTTTCCGAGTTCCCTACCCCACTCATCAGTGGCAACGCCTCAGTTATGGAGAATACCATGTGGGGTGGTCAAGATAGCTTGATTCCCGTGCTTGATATCAATAATGGTGCACTTGATCATATTGTGTCACTGGATTGTGATACCATGGCTTGTGCCAATTGGATGCCGTCCTTTTCTGACCAAGTTGGGGGGCTTTCGAACTTGGCCATTTCAGACTGCAAAATGGGCTTTTATGGAGGGTTTCAGAACTTCAACGGCAGATACCAGCCACATATTGGGGAGTTTGGAGAAGAATGTTGTGGGTTTGTGGAGGATGTTAAGCCACCTGCATATCCTAATGCTGCACGAGAAAACTGGGGACTTCAAGGTAATCAAATGCAAGCAGTTGAAGAGCCTAACATAAAGGTAGGAAGGTACTCAGAAGAAGAGAGGAAAGAAAGAATTCTCCGATATTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTACGCATGTCGGAAAACCTTAGCTGATAGGCGAGTGAGAGTTAGGGGAAGGTTTGCAAGAAACAATGAGCTTTGTGATGAAGACATGACATCAAAAAAACATGAGAATCATCATCACCACAAAGAAGACTTCTACGGTGGTGATTCAATCCAGTTCCAGTTAAAGAATGATGAGGAGGATTGGCTGCAAGAGGCTATGGCAAGTCTAGTTTATTTATCTCATTCTTCACCAGAAGATATGTAA 810 0.4346 MPLSPSSMASIPQFYPNYTFTTHDLSEFPTPLISGNASVMENTMWGGQDSLIPVLDINNGALDHIVSLDCDTMACANWMPSFSDQVGGLSNLAISDCKMGFYGGFQNFNGRYQPHIGEFGEECCGFVEDVKPPAYPNAARENWGLQGNQMQAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCDEDMTSKKHENHHHHKEDFYGGDSIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM 269
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00501 269 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 142 224 IPR045281 GO:0009909
Phco10g00501 269 ProSiteProfiles CCT domain profile. 168 210 IPR010402 GO:0005515
Phco10g00501 269 Pfam CCT motif 168 210 IPR010402 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco10g00501 Phco-Chr10 5190255 5191644 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco10g00501 CCT 8.2e-17 CL0281