Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00500 ATGAAAGAGAATGGTAGAAAACAAGGTACCATGTCGCCATGTGCAGCCTGCAAGCTTCTTCGAAGGAGGTGCACGAGGGATTGTGTGTTTGCTCCTTATTTCCCTGCTGATGAACCCCAGAAGTTTGGCAGTGTGCACAAGGTTTTCGGGGCTAGCAATGTGAACAAAATGCTACAGGAATTACCTGAGCACCAAAGAAGTGATGCAGTGAGTTCAATGGTATATGAAGCCAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGTGGGAGCCATTTCCTCTCTGCAACAACAAGTTGATGTGCTCCAAGCCCAATTGGCGCAGGCACAAGCAGAGGTTGTTCACATGAGAATGCGCCAATTGTCACCACCATCATCAGATCAACACCACCACCAAGCCTCCCTAATGCCCCCTGAGCCCTCCAATTCATCATCAGAAAACTTGTTCCAATCTAGCAGGGTCTTGTCTGCACAAACCAAGTCCCTTTTTGGCATGGACATGGTGGTTGACCAGGCTATGATGGGGCAATCCTTGTGGTCATACTAG 546 0.489 MKENGRKQGTMSPCAACKLLRRRCTRDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQAQLAQAQAEVVHMRMRQLSPPSSDQHHHQASLMPPEPSNSSSENLFQSSRVLSAQTKSLFGMDMVVDQAMMGQSLWSY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00500 181 MobiDBLite consensus disorder prediction 120 150 - -
Phco10g00500 181 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Phco10g00500 181 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Phco10g00500 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 143 - -
Phco10g00500 181 Coils Coil 92 119 - -
Phco10g00500 181 MobiDBLite consensus disorder prediction 121 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00500 Phco-Chr10 5158488 5162558 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco10g00500 LOB 2.9e-43 No_clan