Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00474 ATGCCTCTCTTCCTCTCCGACGAGGAGTTCTCGCGGTGCTCCGGTGATGGCGCCGCCGTGGCCGCGAAGGCCGACGCTTTCATCCGCGGCCTCCTACACGAGCTCGACACCGTCCGCGCCAAGGCCGACGCTGCCGATATCAACGCCGAGCAGAACTGTTCCCTCATCGAGCAGAAATACCTTTCCCTCGCCGCCGAGTTCTCCAAGTTGGAGTCCAACGTCGCCGACCTCCAATCTTCCCTTGATCAGCGCCTCCGCGAACTCGCCGAGACGCAATCGCAGAACCACCAAATTCAATTGCAATCGGTTGAGAAAAATAGGGAGATAGAGCGGTTGAGGATGGAGGTGGGGGAGTTGCACAAGTCAAAGAGGCAGTTGATTGAGTTGAACGAGCAGAAGGATTTGGAGCTTAGTGAGAAGAATGCAACCATGAAGAGTTATCTTGATAAGATTGTCCATTTAAGTGAAAATGCTGCTCATAAGGAGGCTCGATTAAGTGAAGTTGAGGCAGAATTAGCGCGGTGCCGGGCTGCTTGCAGTCGCCTTGAACAGGAGAAGGAGATTATTGAGAAGCAGAATTCTTGGCTGAACGAGGAGTTGAATGGTAAAGTTAACAGTGTTTTTGAGCTACGCAGAAAGAACGCAGATTTGGAAGCTGATATATCTTCCAAGCTTACAGATATGGAGAGACAATTCAACCAATGTTCTCAATCTCTACAGTGGAATAAGGATAGAGTGAGGGAGCTTGAAATGAAGCTTAAATCTGTGCAAGAGGAATTAATTTCAGCTAAGGATGCTGCAGCAGTCAATGAAGAACAATTATCTGCTGAACTCTCCACTGTTAATAAGCTCAATGAGCTATATAAAGAGAGTTCCAAGGAATTGTCAAAAAAGACAACAGACCTAGAGGGTGTGATAAAAGCGTTGGAGTCAGACTTAAAGCAAGTTGAGGATCATTATAAAGGGAAACTTGAGAAGGAATTATCTGCCAGAAAACAGGTTGAAAAGGAGGTCACTGATTTAAAAGAAAAGCTTGAGAAGTCTGAAGCTGAAAGTGAGGCAAGGAAGAAGACCAATGAACTGAATAATCTTCCTCTTAGCAGTTTCACTACTGAACCGTGGATTGAATCAATTGAAGCCGATAGCATGGTGGAGGAAAATAGTTTACTAGTTCCAAAAATTCCTGTTGGAGTTTCTGGAACTGCATTGGCTGCTTCACTTCTTCGAGATGGGTGGAGTTTGGCCAAAATGTATTCAAAATATCAAGAGGCGGTTGATGCATTGAGGCATGAACAATTGGGAAGGAAGGAGTCAGAGGCAGTACTCCAACGGGTTCTATATGAGTTAGAGGAGAAAGCAGAAGCAATTATAGATGAAAGAGAGGAACATGAAAAGATGGCAGATGCATACTCCTTGATGAGCCAAAAGTTGCAAAACTCCCTGAATGAAAATTCCAACTACGAGAAAACCATTCAGGAACTGAAGGCCGATCTAAAAAGGCATGAACGTGATTATAATCTTGTCCTGAAAGAAACTGATGACCTTCGGAAACAGGTGACAGTACTTTTAAAGGAATGTCGAGACATTCAACTTCGTTGTGGCTCAATGGGGTATGATAACGTGGATGATTCTCCAAATATTGCTTCAAGGACAAGTACAGAGACTGAAGCTGAGCATGTCATATCAGAGCACCTTTTGACTTTTAAGGACATTAATGGATTAGTTGAGCAGAATGTCCAACTTAGAAGCCTTGTACGTAGTCTTTCTGGCCAGATTGAAAATCAGGAGGTGGAATTCAAGGAGAAGCTTGAAATGGAACTCAAAAAACATACTGAAGAAGCTGCTTCTAAAGTTGCAGCTGTTCTGCAGAGAGCAGAGGAGCAAGGGCAAATGATTGAGGCGCTTCATGTATCTGTTTCCATGTACAAAAGGTTGTATGAGGAGGAGCATAATCTTCATTTATCTCAAAACCATTCTTCAGAAGCACGTGCAGCTTTTGCAGAAGTTGGAAGAAACAACCTTAAGACTTCAATTGAAAGTTCTCAGGAGGCTGCTAAGAAGTCCCTGGAAAAAGCTGCTGAGCGTGTGAGATGCCTTGAGGATGATTTAGCAAAGTCTAGGAGTAAGATTATTTTATTACAATCAGAACGTGAGAAGATGGCACTTGAAGCGAATTTTTCTAGAGAAAGACTTGATAGCTTTATGAAAGAATTTGAGCATCAGAAAGCTGAAGCAAAAGCCATTTTAGAAAGAAATGTAGAGTTTTCTCAGCTGGTTGTTGACTACCAACGAAAGTTGCGTGAAAGCTCTGAGTCATTGATTGCTGCTGAGGAGCTTGCTAGGAAACTTACTATGGAGATGTCAGTTTTAAAACAAGAAAAGGAAATCATATCAAATGCTGAAAAAAGAGCTTCTGATGAGGTTCGCAGTTTGTCTGAAAGAGTGCAACGTCTGCAGGCTAGTTTGGGTACCATACAAAGTACCGAGGAAGTTCGAGAGGAAGCGAGGGCTGCAGAGAGGGTTAAGCAAGAAGAATATATAAGGAAATTGGAGAAGGAATGGGCTGAAGCCAAGCAAGAGCTAAATGAGGAGCGAGAAAGTGTGCGGAGATTCACACTAGATCGGGACCAGACCATAAAAAATTCTCTGAGACAGGTTGAGGATATGAACAAAGAGTTAGCTAATGCATTGCGTGCAGCTGCATCTGCTGAATCTAGGGCTGCTGTTGCTGAGGCAAAACTCTCCAGTCTGCAAAGAAAATTGGGTTCCACAGATGACAAGCTTGTCGCAATGGGTGAAGAGAGTGGACCTTCAACTTTGTCAAGTGATGAGGTTGTTACTGAATTGCAAAAGGCAAAGGAGGAAATAGAAAAGTTTAAAGAGGAAGCACATGCCAACAAAGTTCACATGCTTCAGTATAAGAGCATCGCGGAGGTGAATGAAGATGCACTGAAACAGATAGAAATGGCACATGAAAAGTTTAAAACAGAGGCTGAAGATTCAAAGAAAGTTCTAGAATCTGAACTTAATTCACTTAGAGAGAAGATGTTAGAGATTGAAAATGAATCTAGTTTGAAGTATGAAGAAGTTGCTTCTGAAACTGTGGGAAAGGAAGAGGCTCTTACATCTGCTATGGCTGAAATCACAAATCTTAAAGAAGAAATTTTAACCAAATCTTCTCAAATTTCAGCATTGGAAATTCAGCTATCGGGTTTAAAGGAAAACCTGGACATGGAGCATCAGAAATGGCGGGCTGCTCAAACTAATTATGAAAGACAGGTTGTTCTCCAGTCTGAAACGATTCAGGAGTTGACAAAAACATCTGAAGCACTATCCTTGCTGCAGGAGGAGGCATCTGAATTACGGAAACTAACCAATACTCAGAAAGTTGAAAATAATGAACTGAAGGCTAGGTGGGAAGAGGACAAGGCACAATTAGAGAAGTCTAGGAATGATGCTGAAAAGAAATACAATGAAATCAATGAACAGAATAAAATATTACACAGTCAACTTGAGGCTTTTCATATTCGATGGGCTGAGAAGGAGCGTAATGCTGCTGGTTTTTCATCTGGAAGTAGTAGTACAGATGCCTTTGGTGACAGTGGCCTCCAAAATGTGATTAATTATCTCAGACGATCAAAAGAAATAGCAGAAACAGAAGTTTCATTGTTAAAACAAGAGAAGCTGCGGTTACAGTCACATCTTGAGAGTGCCTTGAAGGCAGCGGAGTCTGCACATGCATCACTAGAATCTGAGCGTGCTAAATCAAAATCATTTTTGTTTACTGAAGAAGAGTTCAAATCGCTGCAGCTTCAGGTCAGAGAAATGAACTTACTTCGTGAGAGTAACATGCAGCTAAGGGAAGAAAATAAACACAATTTTGAGGAGTGTCAGAAATTGCGCGAAGTAGCACAAAAGGCTAGAACTGAGACAGATAACCTTGAGAATGTCCTTAGGGAAAGAGAAATTGAGCTTGAAGGCTGTAAGAAGGAAATTGAAACGCTAAAATTGGAAAAAGATAATCTCAATAACAAGGTTTTCGAGTTGCTTGAAAGGTGTAAACATGTTGATGTTGAGGATTATGATCGAGTGAAGAAACTTGCTAGAGAACTTCAGGATAAACTAAGAGATAGGGATGCTCGGATTGAGGAAATGAGTAAAAGTCTATCAGAGAAGCAGGATTCTGTTTCACGTCTAGAGAAAGATCTTGCAAACTGCCGATTGGAGCTTGTAGAGAGAGAAAAGAGGATTAATGACATTCTGCATAATGAGGCTAACCTAAAAGTTGATTCGGAGAAGCATAGGAAACTGCTGGCTCAGTTTAAGAAGAGGATTGATATTTTGTTAAGGGAAAAGGAAGACATAGGTAAAGAGAACCAGCAACTTTCTAGGCAACTAGATGAAATTAAACAAGGGAAAAGGTCAACTTCTGATACAACTGGTGAACAAGCGATGAAGGAAGAAAAGGACACAAGAATTCAGATTCTGGAGAAACATCTGGAGAGACTTAGAGATGAATTAAAGAAGGAGAAGGAAGAAAGTCGCCTAGAGAGAGGAAGACGACTGAAGACTGAAAAGGCCATAAAGGACTCTTACAACAATGTTGAGCAGGAGAAAACAAAATTTGTTAATCAAATTGAGAAGCACAAGGAGTCTCTGAAAAAGTTATCTGATGAGGTCGAAAAACTTAAGATAGTTATTGGCAATCTTCCCGAGGGTTTGAATGTGGTTCAACTTCTATCTGGATCCAATGTTGATGACTTTGCTGCTTCCTACATATCTGCTGTTGAAAGTTTTGAAAAGGAAGCTCATTCAATATTTCGTGAGCTTGGAGGTCGCGGTAATCTTGGAGACGCAGCTACAATTACAGATGGTTCAACAGCTGCTACAGGTTCTCTTGTCCAAGTTCAATCCCAAAGCATCCCATCTCTGGCTGTTCCTGGAGCTAGCAGTTTACCACCTAAAGTCACTGGAGAAAGTGAGAAAAGACTTGCATTAACATTACCCAAAGCTAGTGTTGAGACTCGTCGAACAGGTAGAAAATTGGTCAGGCCTAGACTCGTAAGACCTGATGAGCCACAAGGTGACACAGAAATGTCTGATGCCGAAGGACCAGTGGGCAAGCCTGGGCCGTCTAGTGACACAGAAACAAGTAATTTTGCTCAATCATCTCAACCATTGGCTCGTAAACGTGCTGCTCCTACGTCCACTTCTGAATTACGTGAAGAATCTGTTGCATCTGTAGAGAAGAGCTCTGATGTAGTAGCACCTGTGTTGAAGAAGTCAAAAGGGTCAGAGTCCCCAGAAGAGAGTACAGAAGAACAACCTGCTGCAAATCTGGAATTTACTGGCAGTCAACCAGCAAGTGAAGAATTATTTGATAGCAGTGAGTTGCCTCAAGGCCAAAATGAGGAAGGTGAAGCCCAAAATGAAGATGGTGAAATTGCTGTTGGGAATGACGAGGAATCCAAAGACCCTCAACACTTGGATGGTACAAGTCAAGAGGAATTACAAGGGGACAAAACTGGAATTTTAGATGAGAATCCGGATCAATCTGATGAGATGCAGAGGGATCACACTGACCCAGACAACCAGCACTCAACATTGGCAACCAGTGGTGAGAGAGAAGAGGGAGAATTGTTGCCAGATGCTGGAGATCTTGAGGGTGGTAGTGATTTGTCTAACATTGTGGAAAATCAAGAATCTCGGGAAGGTCAATCTGAGTCTGCTGCAACCCCTGAACGTTCCCCAGCACGAGGGGATGATGATGCTCTAGAGGCCGGTGAGATTAACTCTCCTGAGCTTTCAAGCGAAGATAAGAATGATGAAGTTGACTTGGTTGAGGAGGCTGCTGATGATTCTGACAAGTTAATTGATGTTAATGAGCCAATATCAGTTGAGAGTGATCAGGTAGCTGACCCGACACCTGTTGTGAGTGATGGTGCTACTTTGACAAGTAGTGTTACAGAAAGTAGTTCGTCTAAGGTGAACTTACCTGTTCCAAGGCAAGGAACCCCCAGTGCCCCCGCCCCCTCTGAAACAGAAGAGACAACAAAGCAGGCATCACCTATTGGTAGTACCTCAACTACCATAAATTTGTCGGAGCGAGCACGAGAAAGGGCTCAAATGAGACAGGCTGGTTTGGTTTCTACCCCTAATGTTACTAGAGGTCGTGGAAGAGGTGCTCCCCGAGGGCGGGCTCGTGGTCGGACTGTAGTACGCCGACCTCCTCCATCATCTGGTGGTGACCCATGA 6255 0.4297 MPLFLSDEEFSRCSGDGAAVAAKADAFIRGLLHELDTVRAKADAADINAEQNCSLIEQKYLSLAAEFSKLESNVADLQSSLDQRLRELAETQSQNHQIQLQSVEKNREIERLRMEVGELHKSKRQLIELNEQKDLELSEKNATMKSYLDKIVHLSENAAHKEARLSEVEAELARCRAACSRLEQEKEIIEKQNSWLNEELNGKVNSVFELRRKNADLEADISSKLTDMERQFNQCSQSLQWNKDRVRELEMKLKSVQEELISAKDAAAVNEEQLSAELSTVNKLNELYKESSKELSKKTTDLEGVIKALESDLKQVEDHYKGKLEKELSARKQVEKEVTDLKEKLEKSEAESEARKKTNELNNLPLSSFTTEPWIESIEADSMVEENSLLVPKIPVGVSGTALAASLLRDGWSLAKMYSKYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAEAIIDEREEHEKMADAYSLMSQKLQNSLNENSNYEKTIQELKADLKRHERDYNLVLKETDDLRKQVTVLLKECRDIQLRCGSMGYDNVDDSPNIASRTSTETEAEHVISEHLLTFKDINGLVEQNVQLRSLVRSLSGQIENQEVEFKEKLEMELKKHTEEAASKVAAVLQRAEEQGQMIEALHVSVSMYKRLYEEEHNLHLSQNHSSEARAAFAEVGRNNLKTSIESSQEAAKKSLEKAAERVRCLEDDLAKSRSKIILLQSEREKMALEANFSRERLDSFMKEFEHQKAEAKAILERNVEFSQLVVDYQRKLRESSESLIAAEELARKLTMEMSVLKQEKEIISNAEKRASDEVRSLSERVQRLQASLGTIQSTEEVREEARAAERVKQEEYIRKLEKEWAEAKQELNEERESVRRFTLDRDQTIKNSLRQVEDMNKELANALRAAASAESRAAVAEAKLSSLQRKLGSTDDKLVAMGEESGPSTLSSDEVVTELQKAKEEIEKFKEEAHANKVHMLQYKSIAEVNEDALKQIEMAHEKFKTEAEDSKKVLESELNSLREKMLEIENESSLKYEEVASETVGKEEALTSAMAEITNLKEEILTKSSQISALEIQLSGLKENLDMEHQKWRAAQTNYERQVVLQSETIQELTKTSEALSLLQEEASELRKLTNTQKVENNELKARWEEDKAQLEKSRNDAEKKYNEINEQNKILHSQLEAFHIRWAEKERNAAGFSSGSSSTDAFGDSGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSHLESALKAAESAHASLESERAKSKSFLFTEEEFKSLQLQVREMNLLRESNMQLREENKHNFEECQKLREVAQKARTETDNLENVLREREIELEGCKKEIETLKLEKDNLNNKVFELLERCKHVDVEDYDRVKKLARELQDKLRDRDARIEEMSKSLSEKQDSVSRLEKDLANCRLELVEREKRINDILHNEANLKVDSEKHRKLLAQFKKRIDILLREKEDIGKENQQLSRQLDEIKQGKRSTSDTTGEQAMKEEKDTRIQILEKHLERLRDELKKEKEESRLERGRRLKTEKAIKDSYNNVEQEKTKFVNQIEKHKESLKKLSDEVEKLKIVIGNLPEGLNVVQLLSGSNVDDFAASYISAVESFEKEAHSIFRELGGRGNLGDAATITDGSTAATGSLVQVQSQSIPSLAVPGASSLPPKVTGESEKRLALTLPKASVETRRTGRKLVRPRLVRPDEPQGDTEMSDAEGPVGKPGPSSDTETSNFAQSSQPLARKRAAPTSTSELREESVASVEKSSDVVAPVLKKSKGSESPEESTEEQPAANLEFTGSQPASEELFDSSELPQGQNEEGEAQNEDGEIAVGNDEESKDPQHLDGTSQEELQGDKTGILDENPDQSDEMQRDHTDPDNQHSTLATSGEREEGELLPDAGDLEGGSDLSNIVENQESREGQSESAATPERSPARGDDDALEAGEINSPELSSEDKNDEVDLVEEAADDSDKLIDVNEPISVESDQVADPTPVVSDGATLTSSVTESSSSKVNLPVPRQGTPSAPAPSETEETTKQASPIGSTSTTINLSERARERAQMRQAGLVSTPNVTRGRGRGAPRGRARGRTVVRRPPPSSGGDP 2084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00474 2084 Coils Coil 801 821 - -
Phco10g00474 2084 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2069 - -
Phco10g00474 2084 MobiDBLite consensus disorder prediction 1459 1489 - -
Phco10g00474 2084 Coils Coil 840 867 - -
Phco10g00474 2084 MobiDBLite consensus disorder prediction 1893 1913 - -
Phco10g00474 2084 Gene3D - 259 525 - -
Phco10g00474 2084 Coils Coil 1269 1289 - -
Phco10g00474 2084 Coils Coil 1431 1472 - -
Phco10g00474 2084 MobiDBLite consensus disorder prediction 1674 1696 - -
Phco10g00474 2084 Coils Coil 74 115 - -
Phco10g00474 2084 MobiDBLite consensus disorder prediction 1771 1806 - -
Phco10g00474 2084 Coils Coil 995 1022 - -
Phco10g00474 2084 Coils Coil 1104 1170 - -
Phco10g00474 2084 MobiDBLite consensus disorder prediction 1711 1742 - -
Phco10g00474 2084 Coils Coil 1368 1416 - -
Phco10g00474 2084 MobiDBLite consensus disorder prediction 1644 2084 - -
Phco10g00474 2084 Coils Coil 682 709 - -
Phco10g00474 2084 Coils Coil 306 358 - -
Phco10g00474 2084 Coils Coil 1297 1352 - -
Phco10g00474 2084 Coils Coil 879 920 - -
Phco10g00474 2084 Coils Coil 1532 1566 - -
Phco10g00474 2084 Coils Coil 477 518 - -
Phco10g00474 2084 Coils Coil 773 793 - -
Phco10g00474 2084 Pfam TPR/MLP1/MLP2-like protein 1047 1173 IPR012929 GO:0006606
Phco10g00474 2084 Coils Coil 446 466 - -
Phco10g00474 2084 Coils Coil 942 969 - -
Phco10g00474 2084 Coils Coil 239 273 - -
Phco10g00474 2084 Coils Coil 1486 1520 - -
Phco10g00474 2084 Coils Coil 1048 1082 - -
Phco10g00474 2084 MobiDBLite consensus disorder prediction 1817 1882 - -
Phco10g00474 2084 Coils Coil 1232 1252 - -
Phco10g00474 2084 MobiDBLite consensus disorder prediction 1979 2036 - -
Phco10g00474 2084 Coils Coil 151 199 - -
Phco10g00474 2084 Coils Coil 600 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00474 Phco-Chr10 4541280 4577464 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00474 10 4541280 4577464 Phco10g00474 10 4541280 4577464 ECH